Information for 14-ATTGAVTTTVAGG (Motif 26)

G C T A C G A T A C G T T A C G T C G A T G C A A C G T A C G T A G C T T A C G C T G A C A T G A T C G
Reverse Opposite:
T A G C G A T C A G C T A G T C T C G A C G T A T C G A A C G T A G C T A G T C G T C A C G T A C A G T
p-value:1e-4
log p-value:-1.113e+01
Information Content per bp:1.601
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif22.73%
Number of Background Sequences with motif780.4
Percentage of Background Sequences with motif1.47%
Average Position of motif in Targets49.0 +/- 24.8bp
Average Position of motif in Background50.0 +/- 29.3bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nr2e1/MA0676.1/Jaspar

Match Rank:1
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:ATTGAVTTTVAGG
-TTGACTTTT---
 G C T A C G A T A C G T T A C G T C G A T G C A A C G T A C G T A G C T T A C G C T G A C A T G A T C G
A C G T C G A T A C G T T C A G C T G A G A T C G A C T G A C T G A C T C G A T A C G T A C G T A C G T

PB0068.1_Sox1_1/Jaspar

Match Rank:2
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----ATTGAVTTTVAGG
NNNTATTGAATTGNNN-
 A C G T A C G T A C G T A C G T G C T A C G A T A C G T T A C G T C G A T G C A A C G T A C G T A G C T T A C G C T G A C A T G A T C G
T G C A G C T A C A G T G C A T C G T A C G A T C G A T A T C G G C T A C G T A C G A T C G A T C T A G G T C A G C A T C G A T A C G T

DUX4(Homeobox)/Myoblasts-DUX4.V5-ChIP-Seq(GSE75791)/Homer

Match Rank:3
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----ATTGAVTTTVAGG
NWTGATTRGRTTAWN--
 A C G T A C G T A C G T A C G T G C T A C G A T A C G T T A C G T C G A T G C A A C G T A C G T A G C T T A C G C T G A C A T G A T C G
C G T A G C A T C G A T C T A G C G T A A C G T A C G T C T G A T C A G C T A G A C G T A C G T G C T A C G T A G T A C A C G T A C G T

DUX4/MA0468.1/Jaspar

Match Rank:4
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--ATTGAVTTTVAGG
TGATTAAATTA----
 A C G T A C G T G C T A C G A T A C G T T A C G T C G A T G C A A C G T A C G T A G C T T A C G C T G A C A T G A T C G
C G A T C T A G C G T A A C G T C A G T T C G A T C G A C T G A A C G T A G C T C G T A A C G T A C G T A C G T A C G T

ONECUT3/MA0757.1/Jaspar

Match Rank:5
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---ATTGAVTTTVAGG
NTTATTGATTTTTT--
 A C G T A C G T A C G T G C T A C G A T A C G T T A C G T C G A T G C A A C G T A C G T A G C T T A C G C T G A C A T G A T C G
C G T A C G A T G C A T G C T A G C A T A G C T C A T G C T G A G A C T G A C T C G A T G C A T G A C T A G C T A C G T A C G T

PHOX2A/MA0713.1/Jaspar

Match Rank:6
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--ATTGAVTTTVAGG
TAATTAAATTA----
 A C G T A C G T G C T A C G A T A C G T T A C G T C G A T G C A A C G T A C G T A G C T T A C G C T G A C A T G A T C G
G C A T C G T A T C G A A G C T A G C T C T G A T C G A C T G A G A C T G A C T C G T A A C G T A C G T A C G T A C G T

Phox2b/MA0681.1/Jaspar

Match Rank:7
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--ATTGAVTTTVAGG
TAATTAAATTA----
 A C G T A C G T G C T A C G A T A C G T T A C G T C G A T G C A A C G T A C G T A G C T T A C G C T G A C A T G A T C G
G C A T C G T A C T G A A G C T A G C T C T G A T C G A C T G A A G C T G A C T C G T A A C G T A C G T A C G T A C G T

PB0169.1_Sox15_2/Jaspar

Match Rank:8
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----ATTGAVTTTVAGG
TTGAATGAAATTCGA--
 A C G T A C G T A C G T A C G T G C T A C G A T A C G T T A C G T C G A T G C A A C G T A C G T A G C T T A C G C T G A C A T G A T C G
A C G T A C G T T C A G C T G A G T C A A G C T A C T G C G T A G T C A C T G A C A G T G A C T G A T C T A C G T C G A A C G T A C G T

Prop1(Homeobox)/GHFT1-PROP1.biotin-ChIP-Seq(GSE77302)/Homer

Match Rank:9
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--ATTGAVTTTVAGG
TAATTNVATTAN---
 A C G T A C G T G C T A C G A T A C G T T A C G T C G A T G C A A C G T A C G T A G C T T A C G C T G A C A T G A T C G
G C A T C T G A C G T A A G C T A C G T G T A C T C G A C T G A A C G T G A C T C G T A C A T G A C G T A C G T A C G T

Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer

Match Rank:10
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:ATTGAVTTTVAGG
ATTGATTYND---
 G C T A C G A T A C G T T A C G T C G A T G C A A C G T A C G T A G C T T A C G C T G A C A T G A T C G
C G T A A C G T A G C T A T C G G T C A A G C T G A C T A G C T T G A C C G A T A C G T A C G T A C G T