Information for 15-NTCHGSTTGRGAKCAW (Motif 19)

C T A G C G A T A G T C G T C A C T A G A T C G C G A T C G A T A C T G C T A G C A T G G C T A C A G T G T A C C G T A C G T A
Reverse Opposite:
G C A T C G A T C A T G G T C A C G A T G A T C G A T C G T A C C G T A C G T A T A G C G A T C C A G T T C A G C G T A A G T C
p-value:1e-6
log p-value:-1.533e+01
Information Content per bp:1.575
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif22.73%
Number of Background Sequences with motif329.5
Percentage of Background Sequences with motif0.62%
Average Position of motif in Targets47.7 +/- 29.7bp
Average Position of motif in Background48.1 +/- 27.9bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:1
Score:0.56
Offset:5
Orientation:reverse strand
Alignment:NTCHGSTTGRGAKCAW
-----CTTGAGTGGCT
 C T A G C G A T A G T C G T C A C T A G A T C G C G A T C G A T A C T G C T A G C A T G G C T A C A G T G T A C C G T A C G T A
A C G T A C G T A C G T A C G T A C G T A T G C G A C T C A G T C T A G C G T A A C T G C G A T A C T G A T C G G A T C G A C T

PB0029.1_Hic1_1/Jaspar

Match Rank:2
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:NTCHGSTTGRGAKCAW
NGTAGGTTGGCATNNN
 C T A G C G A T A G T C G T C A C T A G A T C G C G A T C G A T A C T G C T A G C A T G G C T A C A G T G T A C C G T A C G T A
C T A G C T A G A G C T C G T A T C A G T C A G A C G T C A G T A C T G A T C G A G T C C G T A G A C T T G C A T C A G G C A T

PB0057.1_Rxra_1/Jaspar

Match Rank:3
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:NTCHGSTTGRGAKCAW----
---NTNNNGGGGTCANGNNN
 C T A G C G A T A G T C G T C A C T A G A T C G C G A T C G A T A C T G C T A G C A T G G C T A C A G T G T A C C G T A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T C G A C A G T A G C T C T G A G C T A T C A G C T A G A C T G A C T G A C G T A G T C C T G A G T A C T C A G C G T A T A G C G C T A

PH0111.1_Nkx2-2/Jaspar

Match Rank:4
Score:0.51
Offset:-2
Orientation:forward strand
Alignment:--NTCHGSTTGRGAKCAW
ATAACCACTTGAAAATT-
 A C G T A C G T C T A G C G A T A G T C G T C A C T A G A T C G C G A T C G A T A C T G C T A G C A T G G C T A C A G T G T A C C G T A C G T A
G C A T C G A T T C G A C T G A T A G C A G T C G C T A G T A C C G A T A G C T T C A G C G T A T C G A C G T A C G T A A C G T C G A T A C G T

PB0118.1_Esrra_2/Jaspar

Match Rank:5
Score:0.51
Offset:3
Orientation:forward strand
Alignment:NTCHGSTTGRGAKCAW----
---GGCGAGGGGTCAAGGGC
 C T A G C G A T A G T C G T C A C T A G A T C G C G A T C G A T A C T G C T A G C A T G G C T A C A G T G T A C C G T A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T A C G C A T G A T G C A C T G G C T A T A C G T C A G C A T G A C T G C G A T A G T C C T G A G C T A C T A G A T C G A T C G G T A C

PB0208.1_Zscan4_2/Jaspar

Match Rank:6
Score:0.51
Offset:2
Orientation:reverse strand
Alignment:NTCHGSTTGRGAKCAW--
--NNNNTTGTGTGCTTNN
 C T A G C G A T A G T C G T C A C T A G A T C G C G A T C G A T A C T G C T A G C A T G G C T A C A G T G T A C C G T A C G T A A C G T A C G T
A C G T A C G T A G C T C G T A C G A T C A G T C A G T C G A T C T A G A G C T A C T G C G A T A C T G A G T C A G C T C G A T A T G C C A T G

RHOXF1/MA0719.1/Jaspar

Match Rank:7
Score:0.51
Offset:8
Orientation:reverse strand
Alignment:NTCHGSTTGRGAKCAW
--------NGGATTAN
 C T A G C G A T A G T C G T C A C T A G A T C G C G A T C G A T A C T G C T A G C A T G G C T A C A G T G T A C C G T A C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A T G C T A G A C T G G T C A A C G T G A C T G C T A C G A T

PB0133.1_Hic1_2/Jaspar

Match Rank:8
Score:0.50
Offset:2
Orientation:reverse strand
Alignment:NTCHGSTTGRGAKCAW--
--NNNNTTGGGCACNNCN
 C T A G C G A T A G T C G T C A C T A G A T C G C G A T C G A T A C T G C T A G C A T G G C T A C A G T G T A C C G T A C G T A A C G T A C G T
A C G T A C G T A G T C G A T C C A G T G C A T G C A T C A G T A C T G A C T G A C T G A G T C C G T A G A T C G T C A G T A C T A G C G T A C

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.50
Offset:4
Orientation:reverse strand
Alignment:NTCHGSTTGRGAKCAW
----GCTCGGSCTC--
 C T A G C G A T A G T C G T C A C T A G A T C G C G A T C G A T A C T G C T A G C A T G G C T A C A G T G T A C C G T A C G T A
A C G T A C G T A C G T A C G T C T A G G T A C A C G T A T G C C T A G A C T G T A C G A G T C A C G T A G T C A C G T A C G T

NFIA/MA0670.1/Jaspar

Match Rank:10
Score:0.49
Offset:4
Orientation:reverse strand
Alignment:NTCHGSTTGRGAKCAW
----NNTTGGCANN--
 C T A G C G A T A G T C G T C A C T A G A T C G C G A T C G A T A C T G C T A G C A T G G C T A C A G T G T A C C G T A C G T A
A C G T A C G T A C G T A C G T G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C A C G T A C G T