Information for 8-WCAAAMTSBACCA (Motif 18)

C G T A G T A C T C G A C T G A G T C A G T A C A C G T A T G C A C T G C T G A A T G C A T G C C T G A
Reverse Opposite:
A G C T T A C G T A C G G A C T T G A C A T C G T C G A C A T G A C G T G A C T A C G T A C T G G C A T
p-value:1e-6
log p-value:-1.575e+01
Information Content per bp:1.584
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif22.73%
Number of Background Sequences with motif302.4
Percentage of Background Sequences with motif0.57%
Average Position of motif in Targets51.8 +/- 27.2bp
Average Position of motif in Background49.6 +/- 31.3bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0176.1_Sox5_2/Jaspar

Match Rank:1
Score:0.51
Offset:-2
Orientation:forward strand
Alignment:--WCAAAMTSBACCA
TATCATAATTAAGGA
 A C G T A C G T C G T A G T A C T C G A C T G A G T C A G T A C A C G T A T G C A C T G C T G A A T G C A T G C C T G A
C G A T G C T A C G A T A G T C C T G A C A G T T G C A G C T A G C A T G A C T C G T A T G C A T A C G C A T G C G T A

NR3C2/MA0727.1/Jaspar

Match Rank:2
Score:0.51
Offset:-4
Orientation:forward strand
Alignment:----WCAAAMTSBACCA
GGGAACACAATGTTCCC
 A C G T A C G T A C G T A C G T C G T A G T A C T C G A C T G A G T C A G T A C A C G T A T G C A C T G C T G A A T G C A T G C C T G A
C A T G C T A G C A T G C G T A T G C A A T G C C T G A G A T C C G T A C T G A G A C T A T C G G A C T G C A T G A T C A G T C G T A C

NR3C1/MA0113.3/Jaspar

Match Rank:3
Score:0.51
Offset:-4
Orientation:forward strand
Alignment:----WCAAAMTSBACCA
GGGTACATAATGTTCCC
 A C G T A C G T A C G T A C G T C G T A G T A C T C G A C T G A G T C A G T A C A C G T A T G C A C T G C T G A A T G C A T G C C T G A
C T A G C T A G C T A G C G A T C G T A A T G C C T G A G A C T C G T A C T G A G A C T A T C G A C G T G C A T G A T C G A T C G T A C

NFYB/MA0502.1/Jaspar

Match Rank:4
Score:0.50
Offset:3
Orientation:forward strand
Alignment:WCAAAMTSBACCA-----
---AAATGGACCAATCAG
 C G T A G T A C T C G A C T G A G T C A G T A C A C G T A T G C A C T G C T G A A T G C A T G C C T G A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T C G A G T C A G T C A A G C T A T C G T C A G C T G A A G T C A G T C C G T A C T G A A C G T T A G C T C G A T A C G

Hnf4a/MA0114.3/Jaspar

Match Rank:5
Score:0.50
Offset:-4
Orientation:forward strand
Alignment:----WCAAAMTSBACCA
GGGGTCAAAGTCCAAT-
 A C G T A C G T A C G T A C G T C G T A G T A C T C G A C T G A G T C A G T A C A C G T A T G C A C T G C T G A A T G C A T G C C T G A
T C A G T C A G C T A G C A T G C A G T A G T C T C G A C T G A C T G A A C T G A C G T A G T C A G T C C T G A T C G A G A C T A C G T

PB0146.1_Mafk_2/Jaspar

Match Rank:6
Score:0.50
Offset:-2
Orientation:forward strand
Alignment:--WCAAAMTSBACCA
GAAAAAATTGCAAGG
 A C G T A C G T C G T A G T A C T C G A C T G A G T C A G T A C A C G T A T G C A C T G C T G A A T G C A T G C C T G A
T C A G G T C A T C G A C T G A C T G A G C T A G C T A C A G T A G C T C A T G A G T C T G C A G T C A A T C G T C A G

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:7
Score:0.49
Offset:-6
Orientation:forward strand
Alignment:------WCAAAMTSBACCA
CANAGNNCAAAGTCCA---
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A G T A C T C G A C T G A G T C A G T A C A C G T A T G C A C T G C T G A A T G C A T G C C T G A
G T A C G C T A T C A G C T G A C T A G C A T G A G C T G A T C T G C A T C G A C T G A A C T G C A G T A G T C G A T C G C T A A C G T A C G T A C G T

PB0141.1_Isgf3g_2/Jaspar

Match Rank:8
Score:0.48
Offset:-1
Orientation:forward strand
Alignment:-WCAAAMTSBACCA
GCAAAACATTACTA
 A C G T C G T A G T A C T C G A C T G A G T C A G T A C A C G T A T G C A C T G C T G A A T G C A T G C C T G A
A C T G T A G C C G T A C G T A C G T A C T G A T A G C C G T A A C G T C A G T C G T A G T A C G A C T C T G A

HNF4G/MA0484.1/Jaspar

Match Rank:9
Score:0.48
Offset:-5
Orientation:forward strand
Alignment:-----WCAAAMTSBACCA
AGAGTCCAAAGTCCA---
 A C G T A C G T A C G T A C G T A C G T C G T A G T A C T C G A C T G A G T C A G T A C A C G T A T G C A C T G C T G A A T G C A T G C C T G A
C G T A T C A G C T G A C T A G C A G T A G T C A G T C T G C A T C G A C T G A C A T G C A G T A G T C G A T C G C T A A C G T A C G T A C G T

ARE(NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:10
Score:0.48
Offset:-4
Orientation:reverse strand
Alignment:----WCAAAMTSBACCA
NAGAACAGNCTGTNCT-
 A C G T A C G T A C G T A C G T C G T A G T A C T C G A C T G A G T C A G T A C A C G T A T G C A C T G C T G A A T G C A T G C C T G A
T C G A C T G A C T A G T C G A C G T A A T G C C G T A A T C G G C A T T A G C G C A T A T C G G C A T A G C T G A T C G A C T A C G T