Information for 5-CAGACATANAGNC (Motif 16)

A G T C C T G A A T C G C G T A A G T C C G T A C A G T C G T A C G T A C G T A A C T G A C T G A G T C
Reverse Opposite:
A C T G A G T C A G T C A C G T A C G T A C G T G C T A A C G T T C A G A C G T A T G C A G C T T C A G
p-value:1e-7
log p-value:-1.688e+01
Information Content per bp:1.723
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif22.73%
Number of Background Sequences with motif240.7
Percentage of Background Sequences with motif0.45%
Average Position of motif in Targets38.0 +/- 28.9bp
Average Position of motif in Background51.3 +/- 31.8bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0166.1_Sox12_2/Jaspar

Match Rank:1
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-CAGACATANAGNC--
AAACAGACAAAGGAAT
 A C G T A G T C C T G A A T C G C G T A A G T C C G T A C A G T C G T A C G T A C G T A A C T G A C T G A G T C A C G T A C G T
T G C A T G C A C G T A A G C T C T G A A T C G C G T A A G T C G C T A T C G A G C T A T A C G T C A G T G C A C G T A G A C T

MF0005.1_Forkhead_class/Jaspar

Match Rank:2
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:CAGACATANAGNC
-AAATAAACA---
 A G T C C T G A A T C G C G T A A G T C C G T A C A G T C G T A C G T A C G T A A C T G A C T G A G T C
A C G T T C G A G T C A T C G A G A C T G T C A C T G A T C G A G A T C C G T A A C G T A C G T A C G T

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:3
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:CAGACATANAGNC
-TGAGTGACAGSC
 A G T C C T G A A T C G C G T A A G T C C G T A C A G T C G T A C G T A C G T A A C T G A C T G A G T C
A C G T C G A T A T C G T C G A A C T G C G A T A T C G C T G A A G T C C G T A A T C G T A C G G A T C

Sox3/MA0514.1/Jaspar

Match Rank:4
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:CAGACATANAGNC
--AAAACAAAGG-
 A G T C C T G A A T C G C G T A A G T C C G T A C A G T C G T A C G T A C G T A A C T G A C T G A G T C
A C G T A C G T T C G A T C G A T C G A C G T A A T G C C G T A C G T A C G T A C T A G T A C G A C G T

PB0163.1_Six6_2/Jaspar

Match Rank:5
Score:0.52
Offset:-3
Orientation:reverse strand
Alignment:---CAGACATANAGNC-
ANNNGGATATATCCNNN
 A C G T A C G T A C G T A G T C C T G A A T C G C G T A A G T C C G T A C A G T C G T A C G T A C G T A A C T G A C T G A G T C A C G T
G T C A C T A G C T A G A G T C T C A G C A T G T C G A A C G T T G C A A G C T C T G A A G C T T G A C A T G C T A G C G C T A A C G T

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:6
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:CAGACATANAGNC--
---GGTTAGAGACCT
 A G T C C T G A A T C G C G T A A G T C C G T A C A G T C G T A C G T A C G T A A C T G A C T G A G T C A C G T A C G T
A C G T A C G T A C G T C T A G T A C G C G A T A C G T C G T A T C A G C T G A T C A G G T C A T G A C A G T C G A C T

Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer

Match Rank:7
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:CAGACATANAGNC
KCCAAAAATAGC-
 A G T C C T G A A T C G C G T A A G T C C G T A C A G T C G T A C G T A C G T A A C T G A C T G A G T C
A C T G G T A C G A T C G C T A C G T A C T G A C G T A C G T A G C A T C T G A T C A G G T A C A C G T

Foxd3/MA0041.1/Jaspar

Match Rank:8
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:CAGACATANAGNC
-AAACAAACATTC
 A G T C C T G A A T C G C G T A A G T C C G T A C A G T C G T A C G T A C G T A A C T G A C T G A G T C
A C G T C T G A T G C A C T G A G A T C G T C A C G T A C G T A G A T C C T G A C G A T C G A T G A T C

Gata1/MA0035.3/Jaspar

Match Rank:9
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:CAGACATANAGNC
-ANAGATAAGAA-
 A G T C C T G A A T C G C G T A A G T C C G T A C A G T C G T A C G T A C G T A A C T G A C T G A G T C
A C G T C T G A T A G C C G T A A C T G C G T A A C G T C G T A C T G A T C A G T C G A T C G A A C G T

SOX10/MA0442.1/Jaspar

Match Rank:10
Score:0.51
Offset:5
Orientation:reverse strand
Alignment:CAGACATANAGNC
-----ACAAAG--
 A G T C C T G A A T C G C G T A A G T C C G T A C A G T C G T A C G T A C G T A A C T G A C T G A G T C
A C G T A C G T A C G T A C G T A C G T G T C A A T G C C G T A T G C A C G T A C T A G A C G T A C G T