Information for 4-GGAAAAHGGTTCA (Motif 13)

A T C G A C T G C G T A C G T A C G T A C G T A G A C T C T A G A C T G A G C T A C G T A G T C C G T A
Reverse Opposite:
A C G T A C T G C G T A C T G A G T A C A G T C C A G T A C G T A C G T A C G T A C G T G T A C A T G C
p-value:1e-7
log p-value:-1.718e+01
Information Content per bp:1.826
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif13.64%
Number of Background Sequences with motif15.7
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets55.7 +/- 30.2bp
Average Position of motif in Background40.3 +/- 28.4bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFATC2/MA0152.1/Jaspar

Match Rank:1
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-GGAAAAHGGTTCA
TGGAAAA-------
 A C G T A T C G A C T G C G T A C G T A C G T A C G T A G A C T C T A G A C T G A G C T A C G T A G T C C G T A
C G A T A C T G A C T G C G T A C G T A T C G A G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFATC3/MA0625.1/Jaspar

Match Rank:2
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---GGAAAAHGGTTCA
AATGGAAAAT------
 A C G T A C G T A C G T A T C G A C T G C G T A C G T A C G T A C G T A G A C T C T A G A C T G A G C T A C G T A G T C C G T A
C G T A C T G A G A C T T A C G C A T G T C G A C G T A G C T A C T G A G C A T A C G T A C G T A C G T A C G T A C G T A C G T

NFAT5/MA0606.1/Jaspar

Match Rank:3
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---GGAAAAHGGTTCA
NATGGAAAAN------
 A C G T A C G T A C G T A T C G A C T G C G T A C G T A C G T A C G T A G A C T C T A G A C T G A G C T A C G T A G T C C G T A
G C T A C T G A C G A T T C A G C T A G C G T A C G T A C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0137.1_Irf3_2/Jaspar

Match Rank:4
Score:0.60
Offset:0
Orientation:forward strand
Alignment:GGAAAAHGGTTCA-
GGAGAAAGGTGCGA
 A T C G A C T G C G T A C G T A C G T A C G T A G A C T C T A G A C T G A G C T A C G T A G T C C G T A A C G T
C T A G C A T G C G T A C T A G C G T A G C T A C G T A A T C G T A C G C G A T A T C G A G T C C T A G C T G A

NFATC1/MA0624.1/Jaspar

Match Rank:5
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---GGAAAAHGGTTCA
NNTGGAAANN------
 A C G T A C G T A C G T A T C G A C T G C G T A C G T A C G T A C G T A G A C T C T A G A C T G A G C T A C G T A G T C C G T A
C G T A C T G A G A C T C T A G A C T G C T G A C T G A G C T A C G T A G C A T A C G T A C G T A C G T A C G T A C G T A C G T

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:6
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---GGAAAAHGGTTCA
AATGGAAAAT------
 A C G T A C G T A C G T A T C G A C T G C G T A C G T A C G T A C G T A G A C T C T A G A C T G A G C T A C G T A G T C C G T A
T C G A T C G A A G C T A C T G A C T G C G T A C G T A G T C A T G C A G C A T A C G T A C G T A C G T A C G T A C G T A C G T

PB0141.1_Isgf3g_2/Jaspar

Match Rank:7
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GGAAAAHGGTTCA-
GCAAAACATTACTA
 A T C G A C T G C G T A C G T A C G T A C G T A G A C T C T A G A C T G A G C T A C G T A G T C C G T A A C G T
A C T G T A G C C G T A C G T A C G T A C T G A T A G C C G T A A C G T C A G T C G T A G T A C G A C T C T G A

PB0146.1_Mafk_2/Jaspar

Match Rank:8
Score:0.57
Offset:1
Orientation:forward strand
Alignment:GGAAAAHGGTTCA---
-GAAAAAATTGCAAGG
 A T C G A C T G C G T A C G T A C G T A C G T A G A C T C T A G A C T G A G C T A C G T A G T C C G T A A C G T A C G T A C G T
A C G T T C A G G T C A T C G A C T G A C T G A G C T A G C T A C A G T A G C T C A T G A G T C T G C A G T C A A T C G T C A G

RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer

Match Rank:9
Score:0.57
Offset:3
Orientation:forward strand
Alignment:GGAAAAHGGTTCA
---AAYTAGGTCA
 A T C G A C T G C G T A C G T A C G T A C G T A G A C T C T A G A C T G A G C T A C G T A G T C C G T A
A C G T A C G T A C G T G C T A C G T A A G T C A C G T T C G A T A C G A C T G A G C T A G T C T C G A

RORA(var.2)/MA0072.1/Jaspar

Match Rank:10
Score:0.56
Offset:0
Orientation:forward strand
Alignment:GGAAAAHGGTTCA-
TATAAGTAGGTCAA
 A T C G A C T G C G T A C G T A C G T A C G T A G A C T C T A G A C T G A G C T A C G T A G T C C G T A A C G T
C G A T C G T A C G A T G T C A C G T A A T C G A C G T C T G A A C T G A C T G A C G T A G T C C G T A T C G A