Information for 3-GWATKGSYAAGTW (Motif 11)

A C T G C G T A C G T A C G A T A C T G A C T G A T C G A G C T C G T A C G T A A C T G A C G T C G A T
Reverse Opposite:
C G T A C G T A A G T C A C G T A C G T T C A G A T G C A G T C G T A C C G T A A C G T C G A T A G T C
p-value:1e-7
log p-value:-1.785e+01
Information Content per bp:1.842
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif13.64%
Number of Background Sequences with motif12.4
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets58.3 +/- 9.3bp
Average Position of motif in Background65.9 +/- 20.7bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SPIC/MA0687.1/Jaspar

Match Rank:1
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-GWATKGSYAAGTW
AAAAAGAGGAAGTA
 A C G T A C T G C G T A C G T A C G A T A C T G A C T G A T C G A G C T C G T A C G T A A C T G A C G T C G A T
G T C A C T G A G T C A G T C A C G T A T A C G T G C A A T C G C A T G G C T A T G C A C T A G G C A T G T C A

PB0058.1_Sfpi1_1/Jaspar

Match Rank:2
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GWATKGSYAAGTW-
TTAAGAGGAAGTTA
 A C T G C G T A C G T A C G A T A C T G A C T G A T C G A G C T C G T A C G T A A C T G A C G T C G A T A C G T
A G C T C G A T C G T A C G T A T C A G T C G A C T A G A C T G C G T A C G T A T A C G G A C T C G A T G T A C

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:3
Score:0.57
Offset:3
Orientation:forward strand
Alignment:GWATKGSYAAGTW
---TTGCCAAG--
 A C T G C G T A C G T A C G A T A C T G A C T G A T C G A G C T C G T A C G T A A C T G A C G T C G A T
A C G T A C G T A C G T A G C T A C G T A C T G A T G C A G T C C G T A C T G A T A C G A C G T A C G T

PH0061.1_Hoxb6/Jaspar

Match Rank:4
Score:0.57
Offset:1
Orientation:forward strand
Alignment:GWATKGSYAAGTW----
-TATTGGTAATTACCTT
 A C T G C G T A C G T A C G A T A C T G A C T G A T C G A G C T C G T A C G T A A C T G A C G T C G A T A C G T A C G T A C G T A C G T
A C G T G C A T G C T A C A G T C A G T A T C G A C T G A G C T G T C A C G T A C G A T C A G T C T G A G T A C T A G C C A G T A G C T

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:5
Score:0.57
Offset:3
Orientation:forward strand
Alignment:GWATKGSYAAGTW-
---AAGGCAAGTGT
 A C T G C G T A C G T A C G A T A C T G A C T G A T C G A G C T C G T A C G T A A C T G A C G T C G A T A C G T
A C G T A C G T A C G T T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T

ELF5(ETS)/T47D-ELF5-ChIP-Seq(GSE30407)/Homer

Match Rank:6
Score:0.55
Offset:2
Orientation:forward strand
Alignment:GWATKGSYAAGTW
--ACVAGGAAGT-
 A C T G C G T A C G T A C G A T A C T G A C T G A T C G A G C T C G T A C G T A A C T G A C G T C G A T
A C G T A C G T G C T A A G T C T A C G T G C A A T C G T C A G G C T A T C G A T C A G A G C T A C G T

NFIA/MA0670.1/Jaspar

Match Rank:7
Score:0.54
Offset:2
Orientation:forward strand
Alignment:GWATKGSYAAGTW
--GGTGCCAAGT-
 A C T G C G T A C G T A C G A T A C T G A C T G A T C G A G C T C G T A C G T A A C T G A C G T C G A T
A C G T A C G T T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T A C G T

MZF1(var.2)/MA0057.1/Jaspar

Match Rank:8
Score:0.54
Offset:0
Orientation:forward strand
Alignment:GWATKGSYAAGTW
GGAGGGGGAA---
 A C T G C G T A C G T A C G A T A C T G A C T G A T C G A G C T C G T A C G T A A C T G A C G T C G A T
A C T G C A G T G T C A A C T G A C T G A T C G A C T G C A T G C T G A C T G A A C G T A C G T A C G T

PRDM1/MA0508.1/Jaspar

Match Rank:9
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-GWATKGSYAAGTW-
AGAAAGTGAAAGTGA
 A C G T A C T G C G T A C G T A C G A T A C T G A C T G A T C G A G C T C G T A C G T A A C T G A C G T C G A T A C G T
C G T A C T A G C T G A T C G A C T G A C T A G C A G T C T A G C G T A C T G A C G T A T C A G A C G T C T A G C T G A

PH0004.1_Nkx3-2/Jaspar

Match Rank:10
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:GWATKGSYAAGTW------
--NTNNTTAAGTGGTTANN
 A C T G C G T A C G T A C G A T A C T G A C T G A T C G A G C T C G T A C G T A A C T G A C G T C G A T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C T A G C A G T A C G T A T C G G C A T C G A T C T G A C T G A A C T G C G A T C T A G A T C G C G A T A G C T C G T A C G A T A C T G