Information for 3-GGCAGGCAGGHAG (Motif 8)

A C T G C T A G A G T C T C G A A C T G C T A G A G T C C G T A A C T G C T A G G A T C C G T A A C T G
Reverse Opposite:
A G T C A C G T C A T G A G T C A G T C A C G T A C T G A G T C A G T C A G C T A C T G A G T C A G T C
p-value:1e-5
log p-value:-1.276e+01
Information Content per bp:1.848
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif6.38%
Number of Background Sequences with motif27.0
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets34.4 +/- 10.6bp
Average Position of motif in Background49.3 +/- 36.0bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:1
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-GGCAGGCAGGHAG
TGGCAGNCTGCCAG
 A C G T A C T G C T A G A G T C T C G A A C T G C T A G A G T C C G T A A C T G C T A G G A T C C G T A A C T G
C A G T A C T G A T C G T G A C G C T A A C T G T A G C G T A C C G A T A C T G T A G C G T A C G C T A T C A G

ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer

Match Rank:2
Score:0.63
Offset:5
Orientation:forward strand
Alignment:GGCAGGCAGGHAG--
-----ACAGGAAGTG
 A C T G C T A G A G T C T C G A A C T G C T A G A G T C C G T A A C T G C T A G G A T C C G T A A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C G A T A G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T T C A G

ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer

Match Rank:3
Score:0.60
Offset:5
Orientation:forward strand
Alignment:GGCAGGCAGGHAG--
-----ACAGGAAGTG
 A C T G C T A G A G T C T C G A A C T G C T A G A G T C C G T A A C T G C T A G G A T C C G T A A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C G A T A G C T G C A A C T G A C T G C G T A C G T A C T A G G A C T T A C G

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:4
Score:0.60
Offset:4
Orientation:forward strand
Alignment:GGCAGGCAGGHAG-
----AACAGGAAGT
 A C T G C T A G A G T C T C G A A C T G C T A G A G T C C G T A A C T G C T A G G A T C C G T A A C T G A C G T
A C G T A C G T A C G T A C G T T G C A C T G A A T G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T

EWSR1-FLI1/MA0149.1/Jaspar

Match Rank:5
Score:0.59
Offset:0
Orientation:forward strand
Alignment:GGCAGGCAGGHAG-----
GGAAGGAAGGAAGGAAGG
 A C T G C T A G A G T C T C G A A C T G C T A G A G T C C G T A A C T G C T A G G A T C C G T A A C T G A C G T A C G T A C G T A C G T A C G T
A C T G C T A G C T G A C T G A C T A G C T A G C T G A C T G A A C T G A T C G T G C A C G T A A C T G A T C G G T C A C T G A C T A G T A C G

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:6
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----GGCAGGCAGGHAG
AGGTGNCAGACAG----
 A C G T A C G T A C G T A C G T A C T G C T A G A G T C T C G A A C T G C T A G A G T C C G T A A C T G C T A G G A T C C G T A A C T G
C T G A C T A G A T C G C G A T A T C G G T C A A T G C C G T A A C T G T G C A A G T C C G T A A T C G A C G T A C G T A C G T A C G T

EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer

Match Rank:7
Score:0.57
Offset:4
Orientation:forward strand
Alignment:GGCAGGCAGGHAG-
----NACAGGAAAT
 A C T G C T A G A G T C T C G A A C T G C T A G A G T C C G T A A C T G C T A G G A T C C G T A A C T G A C G T
A C G T A C G T A C G T A C G T T G C A C T G A A G T C G T C A A C T G A C T G C G T A C G T A C T G A A G C T

ETV1(ETS)/GIST48-ETV1-ChIP-Seq(GSE22441)/Homer

Match Rank:8
Score:0.57
Offset:4
Orientation:forward strand
Alignment:GGCAGGCAGGHAG-
----AACCGGAAGT
 A C T G C T A G A G T C T C G A A C T G C T A G A G T C C G T A A C T G C T A G G A T C C G T A A C T G A C G T
A C G T A C G T A C G T A C G T T C G A C T G A T A G C T G A C T C A G T C A G C G T A C G T A T C A G A G C T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:9
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:GGCAGGCAGGHAG
-CCAGACAG----
 A C T G C T A G A G T C T C G A A C T G C T A G A G T C C G T A A C T G C T A G G A T C C G T A A C T G
A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T A C G T A C G T A C G T

GABPA(ETS)/Jurkat-GABPa-ChIP-Seq(GSE17954)/Homer

Match Rank:10
Score:0.57
Offset:4
Orientation:forward strand
Alignment:GGCAGGCAGGHAG-
----NACCGGAAGT
 A C T G C T A G A G T C T C G A A C T G C T A G A G T C C G T A A C T G C T A G G A T C C G T A A C T G A C G T
A C G T A C G T A C G T A C G T T C G A T C G A T A G C G T A C T C A G T A C G C G T A C G T A T C A G A G C T