Information for 2-TGACAVCCACATGCTC (Motif 3)

A C G T A C T G C T G A A G T C C G T A T C G A G T A C G T A C C G T A G T A C C G T A A G C T C T A G T A G C C G A T A G T C
Reverse Opposite:
A C T G C G T A A T C G A G T C C T G A A C G T A C T G C G A T A C T G C A T G A C G T A C G T A C T G A G C T G T A C C G T A
p-value:1e-7
log p-value:-1.666e+01
Information Content per bp:1.750
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif8.51%
Number of Background Sequences with motif35.9
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets50.8 +/- 28.9bp
Average Position of motif in Background48.1 +/- 31.6bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MEIS1/MA0498.2/Jaspar

Match Rank:1
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-TGACAVCCACATGCTC
TTGACAG----------
 A C G T A C G T A C T G C T G A A G T C C G T A T C G A G T A C G T A C C G T A G T A C C G T A A G C T C T A G T A G C C G A T A G T C
G C A T G C A T A T C G T G C A A G T C C T G A C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

MEIS3/MA0775.1/Jaspar

Match Rank:2
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-TGACAVCCACATGCTC
TTGACAGG---------
 A C G T A C G T A C T G C T G A A G T C C G T A T C G A G T A C G T A C C G T A G T A C C G T A A G C T C T A G T A G C C G A T A G T C
C G A T G C A T A T C G C T G A G A T C C T G A A C T G A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:3
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---TGACAVCCACATGCTC
ARNTGACA-----------
 A C G T A C G T A C G T A C G T A C T G C T G A A G T C C G T A T C G A G T A C G T A C C G T A G T A C C G T A A G C T C T A G T A G C C G A T A G T C
T G C A C T A G G A T C A C G T C T A G C G T A G T A C T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

MEIS2/MA0774.1/Jaspar

Match Rank:4
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-TGACAVCCACATGCTC
TTGACAGC---------
 A C G T A C G T A C T G C T G A A G T C C G T A T C G A G T A C G T A C C G T A G T A C C G T A A G C T C T A G T A G C C G A T A G T C
C G A T C A G T A C T G C G T A G T A C T G C A T A C G T A G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:5
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--TGACAVCCACATGCTC
VBTGWCAGCB--------
 A C G T A C G T A C G T A C T G C T G A A G T C C G T A T C G A G T A C G T A C C G T A G T A C C G T A A G C T C T A G T A G C C G A T A G T C
T C A G A T G C A C G T A C T G C G T A A G T C C G T A A T C G A T G C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer

Match Rank:6
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-TGACAVCCACATGCTC
YTGWCADY---------
 A C G T A C G T A C T G C T G A A G T C C G T A T C G A G T A C G T A C C G T A G T A C C G T A A G C T C T A G T A G C C G A T A G T C
G A C T G C A T C T A G C G A T G A T C T C G A C A T G G A T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:7
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--TGACAVCCACATGCTC
CTTGGCAA----------
 A C G T A C G T A C G T A C T G C T G A A G T C C G T A T C G A G T A C G T A C C G T A G T A C C G T A A G C T C T A G T A G C C G A T A G T C
A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0120.1_Foxj1_2/Jaspar

Match Rank:8
Score:0.51
Offset:-3
Orientation:forward strand
Alignment:---TGACAVCCACATGCTC
ATGTCACAACAACAC----
 A C G T A C G T A C G T A C G T A C T G C T G A A G T C C G T A T C G A G T A C G T A C C G T A G T A C C G T A A G C T C T A G T A G C C G A T A G T C
C G T A A G C T T C A G A C G T T A G C T C G A A G T C C T G A G T C A T G A C C G T A C T G A A T G C T C G A G T A C A C G T A C G T A C G T A C G T

PH0164.1_Six4/Jaspar

Match Rank:9
Score:0.51
Offset:-5
Orientation:forward strand
Alignment:-----TGACAVCCACATGCTC
ATAAATGACACCTATCA----
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G C T G A A G T C C G T A T C G A G T A C G T A C C G T A G T A C C G T A A G C T C T A G T A G C C G A T A G T C
G C T A C A G T C T G A G T C A G C T A A G C T C A T G G T C A A G T C G T C A G T A C A G T C A G C T G T C A A G C T A G T C T C G A A C G T A C G T A C G T A C G T

PB0029.1_Hic1_1/Jaspar

Match Rank:10
Score:0.51
Offset:-4
Orientation:forward strand
Alignment:----TGACAVCCACATGCTC
ACTATGCCAACCTACC----
 A C G T A C G T A C G T A C G T A C G T A C T G C T G A A G T C C G T A T C G A G T A C G T A C C G T A G T A C C G T A A G C T C T A G T A G C C G A T A G T C
C G T A A G T C A C G T C T G A A C G T C T A G A T G C A G T C G T C A T G C A A G T C A G T C G C A T C T G A G A T C G A T C A C G T A C G T A C G T A C G T