Information for 5-ATTTTTCAAAGAGTGG (Motif 8)

C G T A A C G T A C G T A C G T A G C T A C G T A T G C C G T A C G T A C G T A A C T G C T G A C T A G A C G T C A T G A C T G
Reverse Opposite:
G T A C G A T C G T C A G A T C G A C T A G T C A C G T G C A T C G A T T A C G G T C A C T G A C G T A G T C A G T C A C G A T
p-value:1e-9
log p-value:-2.202e+01
Information Content per bp:1.675
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.26%
Number of Background Sequences with motif32.6
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets52.4 +/- 21.3bp
Average Position of motif in Background49.8 +/- 23.0bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:1
Score:0.62
Offset:0
Orientation:forward strand
Alignment:ATTTTTCAAAGAGTGG
CGGTTTCAAA------
 C G T A A C G T A C G T A C G T A G C T A C G T A T G C C G T A C G T A C G T A A C T G C T G A C T A G A C G T C A T G A C T G
T A G C T C A G C A T G G C A T A G C T C G A T A T G C C G T A C G T A G T C A A C G T A C G T A C G T A C G T A C G T A C G T

PB0067.1_Sox18_1/Jaspar

Match Rank:2
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----ATTTTTCAAAGAGTGG
TTCAATTGTTCTAAAA----
 A C G T A C G T A C G T A C G T C G T A A C G T A C G T A C G T A G C T A C G T A T G C C G T A C G T A C G T A A C T G C T G A C T A G A C G T C A T G A C T G
A G C T G C A T A G T C G T C A C G T A C G A T C G A T T C A G C G A T G C A T A G T C G C A T G T C A C G T A G T C A G C T A A C G T A C G T A C G T A C G T

LIN54/MA0619.1/Jaspar

Match Rank:3
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:ATTTTTCAAAGAGTGG
--NATTCAAAT-----
 C G T A A C G T A C G T A C G T A G C T A C G T A T G C C G T A C G T A C G T A A C T G C T G A C T A G A C G T C A T G A C T G
A C G T A C G T C T G A C T G A A C G T A C G T A G T C C T G A C G T A C G T A G C A T A C G T A C G T A C G T A C G T A C G T

PB0062.1_Sox12_1/Jaspar

Match Rank:4
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--ATTTTTCAAAGAGTGG
TAATTGTTCTAAAC----
 A C G T A C G T C G T A A C G T A C G T A C G T A G C T A C G T A T G C C G T A C G T A C G T A A C T G C T G A C T A G A C G T C A T G A C T G
G A C T G C T A C G T A A C G T C G A T C T A G C G A T G A C T T G A C G C A T G T C A C G T A G C T A G T A C A C G T A C G T A C G T A C G T

PB0148.1_Mtf1_2/Jaspar

Match Rank:5
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-ATTTTTCAAAGAGTGG
NNTTTTTCTTATNT---
 A C G T C G T A A C G T A C G T A C G T A G C T A C G T A T G C C G T A C G T A C G T A A C T G C T G A C T A G A C G T C A T G A C T G
A C T G G C A T A C G T C G A T C G A T C G A T C A G T G T A C C G A T C G A T G T C A C G A T G C A T C A G T A C G T A C G T A C G T

PB0072.1_Sox5_1/Jaspar

Match Rank:6
Score:0.58
Offset:-5
Orientation:reverse strand
Alignment:-----ATTTTTCAAAGAGTGG
NNTTTATTGTTCTNNN-----
 A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C G T A C G T A G C T A C G T A T G C C G T A C G T A C G T A A C T G C T G A C T A G A C G T C A T G A C T G
G C T A C G A T G C A T G A C T G C A T C G T A G A C T G C A T C T A G G A C T A G C T G A T C G A C T G C T A C G T A G C T A A C G T A C G T A C G T A C G T A C G T

PB0183.1_Sry_2/Jaspar

Match Rank:7
Score:0.57
Offset:-5
Orientation:reverse strand
Alignment:-----ATTTTTCAAAGAGTGG
CNNNTATTGTTCNNNNN----
 A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C G T A C G T A G C T A C G T A T G C C G T A C G T A C G T A A C T G C T G A C T A G A C G T C A T G A C T G
A T G C C T G A A G T C A G T C G A C T C G T A A C G T A G C T T C A G G C A T A C G T A G T C G T A C C A T G G C A T C T A G C T G A A C G T A C G T A C G T A C G T

PB0070.1_Sox30_1/Jaspar

Match Rank:8
Score:0.57
Offset:-6
Orientation:reverse strand
Alignment:------ATTTTTCAAAGAGTGG
ANNTCCATTGTTCNNN------
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C G T A C G T A G C T A C G T A T G C C G T A C G T A C G T A A C T G C T G A C T A G A C G T C A T G A C T G
C T G A C T G A C A G T C G A T A G T C G T A C G C T A A G C T C A G T T C A G C G A T A G C T T A G C G C T A C G A T G A C T A C G T A C G T A C G T A C G T A C G T A C G T

PB0173.1_Sox21_2/Jaspar

Match Rank:9
Score:0.56
Offset:-5
Orientation:forward strand
Alignment:-----ATTTTTCAAAGAGTGG
AATCAATTGTTCCGCTA----
 A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C G T A C G T A G C T A C G T A T G C C G T A C G T A C G T A A C T G C T G A C T A G A C G T C A T G A C T G
T G A C T C A G A G C T A T G C G C T A C G T A A G C T C G A T A T C G C G A T A G C T A T G C T G A C A C T G G A T C C A G T T C G A A C G T A C G T A C G T A C G T

Sox5/MA0087.1/Jaspar

Match Rank:10
Score:0.56
Offset:0
Orientation:forward strand
Alignment:ATTTTTCAAAGAGTGG
ATTGTTA---------
 C G T A A C G T A C G T A C G T A G C T A C G T A T G C C G T A C G T A C G T A A C T G C T G A C T A G A C G T C A T G A C T G
C G T A A C G T A C G T C T A G A G C T G A C T C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T