Information for 12-AAAAAGCATT (Motif 22)

C G T A C G T A C G T A C G T A C G T A A C T G A G T C C G T A A C G T A C G T
Reverse Opposite:
C G T A C G T A A C G T A C T G A G T C A C G T A C G T A C G T A C G T A C G T
p-value:1e-6
log p-value:-1.572e+01
Information Content per bp:1.530
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.58%
Number of Background Sequences with motif4.8
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets47.6 +/- 22.5bp
Average Position of motif in Background38.3 +/- 32.9bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Foxd3/MA0041.1/Jaspar

Match Rank:1
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-AAAAAGCATT-
AAACAAACATTC
 A C G T C G T A C G T A C G T A C G T A C G T A A C T G A G T C C G T A A C G T A C G T A C G T
C T G A T G C A C T G A G A T C G T C A C G T A C G T A G A T C C T G A C G A T C G A T G A T C

PB0166.1_Sox12_2/Jaspar

Match Rank:2
Score:0.64
Offset:-6
Orientation:forward strand
Alignment:------AAAAAGCATT
AAACAGACAAAGGAAT
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A C G T A C G T A C G T A A C T G A G T C C G T A A C G T A C G T
T G C A T G C A C G T A A G C T C T G A A T C G C G T A A G T C G C T A T C G A G C T A T A C G T C A G T G C A C G T A G A C T

PB0135.1_Hoxa3_2/Jaspar

Match Rank:3
Score:0.62
Offset:0
Orientation:forward strand
Alignment:AAAAAGCATT----
AAAAACCATTAAGG
 C G T A C G T A C G T A C G T A C G T A A C T G A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T
T C G A G T C A C T G A G C T A C G T A T G A C A G T C T G C A C G A T G C A T C G T A C T G A A T C G T C A G

ONECUT3/MA0757.1/Jaspar

Match Rank:4
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-AAAAAGCATT---
AAAAAATCAATAAT
 A C G T C G T A C G T A C G T A C G T A C G T A A C T G A G T C C G T A A C G T A C G T A C G T A C G T A C G T
T C G A C T G A C G T A G C T A C T G A C T G A G A C T G T A C T C G A C G T A C G A T C G T A G C T A G C A T

Barx1(Homeobox)/Stomach-Barx1.3xFlag-ChIP-Seq(GSE69483)/Homer

Match Rank:5
Score:0.62
Offset:2
Orientation:forward strand
Alignment:AAAAAGCATT--
--AAACMATTAN
 C G T A C G T A C G T A C G T A C G T A A C T G A G T C C G T A A C G T A C G T A C G T A C G T
A C G T A C G T T C G A C T G A C T G A A T G C G T A C G T C A A G C T A G C T C G T A T C A G

Nr2e3/MA0164.1/Jaspar

Match Rank:6
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:AAAAAGCATT
---AAGCTTG
 C G T A C G T A C G T A C G T A C G T A A C T G A G T C C G T A A C G T A C G T
A C G T A C G T A C G T C G T A C G T A A C T G A T G C A C G T A C G T C T A G

PB0146.1_Mafk_2/Jaspar

Match Rank:7
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----AAAAAGCATT-
GAAAAAATTGCAAGG
 A C G T A C G T A C G T A C G T C G T A C G T A C G T A C G T A C G T A A C T G A G T C C G T A A C G T A C G T A C G T
T C A G G T C A T C G A C T G A C T G A G C T A G C T A C A G T A G C T C A T G A G T C T G C A G T C A A T C G T C A G

Foxq1/MA0040.1/Jaspar

Match Rank:8
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:AAAAAGCATT-
AATAAACAATN
 C G T A C G T A C G T A C G T A C G T A A C T G A G T C C G T A A C G T A C G T A C G T
G C T A T G C A A G C T C G T A C G T A C G T A A G T C C G T A C G T A A G C T C G T A

PH0006.1_Barhl2/Jaspar

Match Rank:9
Score:0.57
Offset:0
Orientation:forward strand
Alignment:AAAAAGCATT------
AAAAACCAATTAAGAA
 C G T A C G T A C G T A C G T A C G T A A C T G A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G T C A G T C A G T C A C T G A T C G A G A T C A G T C C T G A G C T A A C G T A C G T C G T A C T G A A T C G G C T A G C T A

PB0182.1_Srf_2/Jaspar

Match Rank:10
Score:0.57
Offset:-6
Orientation:forward strand
Alignment:------AAAAAGCATT-
GTTAAAAAAAAAAATTA
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A C G T A C G T A C G T A A C T G A G T C C G T A A C G T A C G T A C G T
T A C G A C G T C G A T C G T A C T G A C T G A T G C A T G C A G T C A G C T A G T C A G T C A G T C A T G C A A C G T G C A T G C A T