Information for 4-AATGTCTGWMWWT (Motif 8)

C G T A C G T A A C G T A C T G C G A T A G T C A C G T A C T G C G A T G T C A G C A T C G A T C G A T
Reverse Opposite:
C G T A C G T A C G T A A C G T C G T A A G T C C G T A A C T G C G T A A G T C C G T A A C G T A C G T
p-value:1e-11
log p-value:-2.545e+01
Information Content per bp:1.873
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.80%
Number of Background Sequences with motif5.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets41.9 +/- 24.5bp
Average Position of motif in Background54.8 +/- 28.7bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0060.1_Smad3_1/Jaspar

Match Rank:1
Score:0.72
Offset:-3
Orientation:reverse strand
Alignment:---AATGTCTGWMWWT-
NNTNNTGTCTGGNNTNG
 A C G T A C G T A C G T C G T A C G T A A C G T A C T G C G A T A G T C A C G T A C T G C G A T G T C A G C A T C G A T C G A T A C G T
C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.63
Offset:1
Orientation:forward strand
Alignment:AATGTCTGWMWWT
-CTGTCTGG----
 C G T A C G T A A C G T A C T G C G A T A G T C A C G T A C T G C G A T G T C A G C A T C G A T C G A T
A C G T A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T A C G T A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:3
Score:0.63
Offset:1
Orientation:forward strand
Alignment:AATGTCTGWMWWT
-TWGTCTGV----
 C G T A C G T A A C G T A C T G C G A T A G T C A C G T A C T G C G A T G T C A G C A T C G A T C G A T
A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T A C G T A C G T A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-AATGTCTGWMWWT
VBSYGTCTGG----
 A C G T C G T A C G T A A C G T A C T G C G A T A G T C A C G T A C T G C G A T G T C A G C A T C G A T C G A T
T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T A C G T A C G T A C G T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:AATGTCTGWMWWT-
--TGTCTGDCACCT
 C G T A C G T A A C G T A C T G C G A T A G T C A C G T A C T G C G A T G T C A G C A T C G A T C G A T A C G T
A C G T A C G T G C A T A C T G C G A T A G T C A C G T T A C G C A T G A G T C C G T A T A G C G A T C G A C T

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:6
Score:0.61
Offset:2
Orientation:forward strand
Alignment:AATGTCTGWMWWT
--GGTCTGGCAT-
 C G T A C G T A A C G T A C T G C G A T A G T C A C G T A C T G C G A T G T C A G C A T C G A T C G A T
A C G T A C G T A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T A C G T

EOMES/MA0800.1/Jaspar

Match Rank:7
Score:0.57
Offset:0
Orientation:forward strand
Alignment:AATGTCTGWMWWT
AAGGTGTGAAAAT
 C G T A C G T A A C G T A C T G C G A T A G T C A C G T A C T G C G A T G T C A G C A T C G A T C G A T
C T G A C T G A C T A G A C T G A G C T T C A G G A C T A C T G T C G A G C T A G T C A C G T A G A C T

Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer

Match Rank:8
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--AATGTCTGWMWWT
CCATTGTATGCAAAT
 A C G T A C G T C G T A C G T A A C G T A C T G C G A T A G T C A C G T A C T G C G A T G T C A G C A T C G A T C G A T
A G T C G A T C G C T A C G A T A C G T T A C G G C A T C T G A G A C T A C T G A G T C G C T A C T G A T C G A C A G T

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:9
Score:0.56
Offset:1
Orientation:forward strand
Alignment:AATGTCTGWMWWT-
-CTGTCTGTCACCT
 C G T A C G T A A C G T A C T G C G A T A G T C A C G T A C T G C G A T G T C A G C A T C G A T C G A T A C G T
A C G T T A G C G C A T T C A G A C G T A G T C A C G T T A C G C A G T A T G C G C T A T A G C G A T C G A C T

TBX21/MA0690.1/Jaspar

Match Rank:10
Score:0.56
Offset:0
Orientation:forward strand
Alignment:AATGTCTGWMWWT
AAGGTGTGAA---
 C G T A C G T A A C G T A C T G C G A T A G T C A C G T A C T G C G A T G T C A G C A T C G A T C G A T
C T G A C T G A C T A G A C T G A G C T C A T G G A C T A C T G C T G A G C T A A C G T A C G T A C G T