Information for 5-AGGGCCTCCCCAGCAA (Motif 3)

G T C A C T A G A C T G C T A G G T A C A G T C A C G T T G A C A G T C A G T C A G T C C G T A A C T G A G T C G C T A C G T A
Reverse Opposite:
A C G T C G A T A C T G A G T C A C G T A C T G C T A G C T A G A C T G C G T A A C T G A C T G A G T C A G T C A G T C A C G T
p-value:1e-13
log p-value:-3.069e+01
Information Content per bp:1.843
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.68%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets69.9 +/- 14.4bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.56
Offset:6
Orientation:reverse strand
Alignment:AGGGCCTCCCCAGCAA
------TGCCCAGNHW
 G T C A C T A G A C T G C T A G G T A C A G T C A C G T T G A C A G T C A G T C A G T C C G T A A C T G A G T C G C T A C G T A
A C G T A C G T A C G T A C G T A C G T A C G T C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:2
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-AGGGCCTCCCCAGCAA
CNAGGCCT---------
 A C G T G T C A C T A G A C T G C T A G G T A C A G T C A C G T T G A C A G T C A G T C A G T C C G T A A C T G A G T C G C T A C G T A
A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

MAFF/MA0495.1/Jaspar

Match Rank:3
Score:0.54
Offset:3
Orientation:forward strand
Alignment:AGGGCCTCCCCAGCAA-----
---GCTGAGTCAGCAATTTTT
 G T C A C T A G A C T G C T A G G T A C A G T C A C G T T G A C A G T C A G T C A G T C C G T A A C T G A G T C G C T A C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A T C G G T A C G C A T C T A G C G T A T A C G G C A T G T A C C G T A C A T G A G T C C G T A C G T A G C A T G C A T G C A T G A C T G C A T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:4
Score:0.54
Offset:1
Orientation:forward strand
Alignment:AGGGCCTCCCCAGCAA
-AGGCCTAG-------
 G T C A C T A G A C T G C T A G G T A C A G T C A C G T T G A C A G T C A G T C A G T C C G T A A C T G A G T C G C T A C G T A
A C G T T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0110.1_Bcl6b_2/Jaspar

Match Rank:5
Score:0.54
Offset:0
Orientation:forward strand
Alignment:AGGGCCTCCCCAGCAA
ATCCCCGCCCCTAAAA
 G T C A C T A G A C T G C T A G G T A C A G T C A C G T T G A C A G T C A G T C A G T C C G T A A C T G A G T C G C T A C G T A
G T C A A C G T A T G C A T G C A G T C G A T C C T A G G A T C T G A C A T G C A G T C C G A T G C T A G T C A G C T A T G C A

MAFK/MA0496.1/Jaspar

Match Rank:6
Score:0.53
Offset:4
Orientation:forward strand
Alignment:AGGGCCTCCCCAGCAA---
----CTGAGTCAGCAATTT
 G T C A C T A G A C T G C T A G G T A C A G T C A C G T T G A C A G T C A G T C A G T C C G T A A C T G A G T C G C T A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G T A C G C A T C T A G C G T A T A C G A G C T G T A C C G T A A C T G A T G C G C T A C G T A G C A T G C A T G C A T

PB0041.1_Mafb_1/Jaspar

Match Rank:7
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:AGGGCCTCCCCAGCAA----
---NCTANGTCAGCAAATTT
 G T C A C T A G A C T G C T A G G T A C A G T C A C G T T G A C A G T C A G T C A G T C C G T A A C T G A G T C G C T A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C A G T G A T C A G C T C G T A G C T A T C A G A C G T G T A C C G T A C A T G G A T C C G T A G T C A C G T A G C A T G A C T C G A T

POL010.1_DCE_S_III/Jaspar

Match Rank:8
Score:0.52
Offset:10
Orientation:forward strand
Alignment:AGGGCCTCCCCAGCAA
----------CAGCC-
 G T C A C T A G A C T G C T A G G T A C A G T C A C G T T G A C A G T C A G T C A G T C C G T A A C T G A G T C G C T A C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C A C G T

Zfx/MA0146.2/Jaspar

Match Rank:9
Score:0.50
Offset:-6
Orientation:forward strand
Alignment:------AGGGCCTCCCCAGCAA
GGGGCCGAGGCCTG--------
 A C G T A C G T A C G T A C G T A C G T A C G T G T C A C T A G A C T G C T A G G T A C A G T C A C G T T G A C A G T C A G T C A G T C C G T A A C T G A G T C G C T A C G T A
A T C G A T C G T A C G C T A G A T G C G A T C A C T G T G C A T C A G A T C G A G T C A G T C A G C T T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NRL/MA0842.1/Jaspar

Match Rank:10
Score:0.50
Offset:8
Orientation:reverse strand
Alignment:AGGGCCTCCCCAGCAA---
--------GTCAGCANNTN
 G T C A C T A G A C T G C T A G G T A C A G T C A C G T T G A C A G T C A G T C A G T C C G T A A C T G A G T C G C T A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C A G C G A T G T A C C G T A C A T G A G T C C T G A C G T A C G T A G C A T G C A T