Information for 4-TCCTGCHAGGABACTG (Motif 2)

A C G T A G T C A G T C A C G T A C T G A G T C G A C T C T G A C T A G A T C G C G T A A C G T C G T A A G T C A C G T A C T G
Reverse Opposite:
A G T C C G T A A C T G C G A T T A C G A C G T A T G C A G T C A G C T C A G T A C T G A G T C C G T A A C T G A C T G C G T A
p-value:1e-13
log p-value:-3.069e+01
Information Content per bp:1.842
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.68%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets42.3 +/- 17.9bp
Average Position of motif in Background90.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:1
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--TCCTGCHAGGABACTG
CCCCCTGCTGTG------
 A C G T A C G T A C G T A G T C A G T C A C G T A C T G A G T C G A C T C T G A C T A G A T C G C G T A A C G T C G T A A G T C A C G T A C T G
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T A C G T A C G T A C G T A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:2
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----TCCTGCHAGGABACTG
GGCCYCCTGCTGDGH-----
 A C G T A C G T A C G T A C G T A C G T A G T C A G T C A C G T A C T G A G T C G A C T C T G A C T A G A T C G C G T A A C G T C G T A A G T C A C G T A C T G
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C A C G T A C G T A C G T A C G T A C G T

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:3
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---TCCTGCHAGGABACTG
ACATCCTGNT---------
 A C G T A C G T A C G T A C G T A G T C A G T C A C G T A C T G A G T C G A C T C T G A C T A G A T C G C G T A A C G T C G T A A G T C A C G T A C T G
C T G A A T G C C G T A A C G T A G T C A G T C A C G T A C T G A T C G G C A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0205.1_Zic1_2/Jaspar

Match Rank:4
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--TCCTGCHAGGABACTG
TNTCCTGCTGTGNNG---
 A C G T A C G T A C G T A G T C A G T C A C G T A C T G A G T C G A C T C T G A C T A G A T C G C G T A A C G T C G T A A G T C A C G T A C T G
G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G A C G T A C G T A C G T

PB0206.1_Zic2_2/Jaspar

Match Rank:5
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--TCCTGCHAGGABACTG
TCNCCTGCTGNGNNN---
 A C G T A C G T A C G T A G T C A G T C A C G T A C T G A G T C G A C T C T G A C T A G A T C G C G T A A C G T C G T A A G T C A C G T A C T G
G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G A C G T A C G T A C G T

PB0207.1_Zic3_2/Jaspar

Match Rank:6
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--TCCTGCHAGGABACTG
NNTCCTGCTGTGNNN---
 A C G T A C G T A C G T A G T C A G T C A C G T A C T G A G T C G A C T C T G A C T A G A T C G C G T A A C G T C G T A A G T C A C G T A C T G
G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C A C G T A C G T A C G T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:7
Score:0.54
Offset:1
Orientation:forward strand
Alignment:TCCTGCHAGGABACTG
-CCTGCTGAGH-----
 A C G T A G T C A G T C A C G T A C T G A G T C G A C T C T G A C T A G A T C G C G T A A C G T C G T A A G T C A C G T A C T G
A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A A C G T A C G T A C G T A C G T A C G T

Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer(0.967)

Match Rank:8
Score:0.54
Offset:-5
Orientation:forward strand
Alignment:-----TCCTGCHAGGABACTG
NNAYTTCCTGHN---------
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C A C G T A C T G A G T C G A C T C T G A C T A G A T C G C G T A A C G T C G T A A G T C A C G T A C T G
A T G C A G T C C T G A A G T C C G A T A C G T A G T C A G T C A C G T A T C G G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer

Match Rank:9
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----TCCTGCHAGGABACTG
CACTTCCTGT----------
 A C G T A C G T A C G T A C G T A C G T A G T C A G T C A C G T A C T G A G T C G A C T C T G A C T A G A T C G C G T A A C G T C G T A A G T C A C G T A C T G
A G T C T C G A A G T C C G A T A C G T A G T C A G T C A C G T A T C G A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer

Match Rank:10
Score:0.52
Offset:-3
Orientation:reverse strand
Alignment:---TCCTGCHAGGABACTG
ATTTCCTGTN---------
 A C G T A C G T A C G T A C G T A G T C A G T C A C G T A C T G A G T C G A C T C T G A C T A G A T C G C G T A A C G T C G T A A G T C A C G T A C T G
C T G A A G C T A C G T A C G T A G T C A G T C A C G T A C T G G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T