Information for 8-GAACGATTAA (Motif 12)

A C T G G T C A C G T A T A G C A C T G C G T A A C G T A C G T C G T A G T C A
Reverse Opposite:
A C G T A C G T C G T A C G T A C G A T G T A C A T C G A C G T A C G T A G T C
p-value:1e-7
log p-value:-1.802e+01
Information Content per bp:1.872
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.91%
Number of Background Sequences with motif23.7
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets41.0 +/- 23.6bp
Average Position of motif in Background51.6 +/- 23.9bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

VENTX/MA0724.1/Jaspar

Match Rank:1
Score:0.78
Offset:1
Orientation:forward strand
Alignment:GAACGATTAA
-ACCGATTAG
 A C T G G T C A C G T A T A G C A C T G C G T A A C G T A C G T C G T A G T C A
A C G T C G T A T G A C G A T C T C A G G T C A A C G T A C G T C G T A C T A G

PB0135.1_Hoxa3_2/Jaspar

Match Rank:2
Score:0.74
Offset:-2
Orientation:forward strand
Alignment:--GAACGATTAA--
AAAAACCATTAAGG
 A C G T A C G T A C T G G T C A C G T A T A G C A C T G C G T A A C G T A C G T C G T A G T C A A C G T A C G T
T C G A G T C A C T G A G C T A C G T A T G A C A G T C T G C A C G A T G C A T C G T A C T G A A T C G T C A G

Barx1(Homeobox)/Stomach-Barx1.3xFlag-ChIP-Seq(GSE69483)/Homer

Match Rank:3
Score:0.73
Offset:0
Orientation:forward strand
Alignment:GAACGATTAA
AAACMATTAN
 A C T G G T C A C G T A T A G C A C T G C G T A A C G T A C G T C G T A G T C A
T C G A C T G A C T G A A T G C G T A C G T C A A G C T A G C T C G T A T C A G

OTX2/MA0712.1/Jaspar

Match Rank:4
Score:0.70
Offset:2
Orientation:reverse strand
Alignment:GAACGATTAA
--NGGATTAA
 A C T G G T C A C G T A T A G C A C T G C G T A A C G T A C G T C G T A G T C A
A C G T A C G T T G C A T C A G C T A G G T C A A C G T G C A T C G T A C T G A

OTX1/MA0711.1/Jaspar

Match Rank:5
Score:0.70
Offset:2
Orientation:reverse strand
Alignment:GAACGATTAA
--CGGATTAN
 A C T G G T C A C G T A T A G C A C T G C G T A A C G T A C G T C G T A G T C A
A C G T A C G T T A G C T A C G A T C G G T C A A C G T G C A T C G T A C T G A

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:6
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:GAACGATTAA-
-VRGGATTARN
 A C T G G T C A C G T A T A G C A C T G C G T A A C G T A C G T C G T A G T C A A C G T
A C G T T C G A C T A G C T A G C T A G G T C A A C G T C G A T C G T A C T G A T A G C

BARX1/MA0875.1/Jaspar

Match Rank:7
Score:0.68
Offset:2
Orientation:forward strand
Alignment:GAACGATTAA
--GCAATTAG
 A C T G G T C A C G T A T A G C A C T G C G T A A C G T A C G T C G T A G T C A
A C G T A C G T T C A G G A T C T G C A T G C A A C G T A C G T C G T A T C A G

PB0072.1_Sox5_1/Jaspar

Match Rank:8
Score:0.68
Offset:-4
Orientation:forward strand
Alignment:----GAACGATTAA--
TTTAGAACAATAAAAT
 A C G T A C G T A C G T A C G T A C T G G T C A C G T A T A G C A C T G C G T A A C G T A C G T C G T A G T C A A C G T A C G T
C G A T G C A T C A G T C T G A C T A G T C G A C G T A A G T C C G T A C G T A G C A T C G T A C T G A C G T A G C T A C G A T

BARHL2/MA0635.1/Jaspar

Match Rank:9
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:GAACGATTAA-
-ANCGTTTANN
 A C T G G T C A C G T A T A G C A C T G C G T A A C G T A C G T C G T A G T C A A C G T
A C G T C T G A A G T C G A T C C T A G G C A T A C G T C G A T C G T A C T A G A T G C

GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer

Match Rank:10
Score:0.67
Offset:2
Orientation:forward strand
Alignment:GAACGATTAA
--RGGATTAR
 A C T G G T C A C G T A T A G C A C T G C G T A A C G T A C G T C G T A G T C A
A C G T A C G T T C A G C T A G C T A G T G C A C G A T C G A T C G T A C T A G