Information for 18-TTCAAGTGTA (Motif 31)

A C G T A C G T A G T C C G T A C G T A A C T G A C G T A C T G A C G T C G T A
Reverse Opposite:
A C G T C G T A A G T C C G T A A G T C A C G T A C G T A C T G C G T A C G T A
p-value:1e-3
log p-value:-7.712e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif25.00%
Number of Background Sequences with motif34.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets96.0 +/- 0.0bp
Average Position of motif in Background65.4 +/- 40.3bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NKX2-8/MA0673.1/Jaspar

Match Rank:1
Score:0.79
Offset:0
Orientation:reverse strand
Alignment:TTCAAGTGTA
NTCAAGTGG-
 A C G T A C G T A G T C C G T A C G T A A C T G A C G T A C T G A C G T C G T A
A G C T C G A T A T G C C T G A C T G A C T A G C A G T C T A G A T C G A C G T

NKX2-3/MA0672.1/Jaspar

Match Rank:2
Score:0.74
Offset:0
Orientation:reverse strand
Alignment:TTCAAGTGTA
NTCAAGTGGN
 A C G T A C G T A G T C C G T A C G T A A C T G A C G T A C T G A C G T C G T A
A G C T G C A T A G T C C T G A G T C A A C T G C G A T C T A G A T C G A C G T

PH0111.1_Nkx2-2/Jaspar

Match Rank:3
Score:0.74
Offset:-4
Orientation:reverse strand
Alignment:----TTCAAGTGTA---
NANTTTCAAGTGGTTAN
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A C G T A A C T G A C G T A C T G A C G T C G T A A C G T A C G T A C G T
G C T A T G C A G C A T G C A T A G C T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G G A C T A G C T G C T A C G A T

PH0114.1_Nkx2-5/Jaspar

Match Rank:4
Score:0.72
Offset:-3
Orientation:reverse strand
Alignment:---TTCAAGTGTA---
AAATTCAAGTGGNTTN
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A C G T A A C T G A C G T A C T G A C G T C G T A A C G T A C G T A C G T
C T G A C T G A C G T A A G C T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G G T A C G A C T G A C T C G T A

PH0171.1_Nkx2-1/Jaspar

Match Rank:5
Score:0.70
Offset:-3
Orientation:reverse strand
Alignment:---TTCAAGTGTA---
AANTTCAAGTGGCTTN
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A C G T A A C T G A C G T A C T G A C G T C G T A A C G T A C G T A C G T
C G T A C G T A C A G T A C G T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G T A G C G A C T A C G T T C G A

PH0113.1_Nkx2-4/Jaspar

Match Rank:6
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---TTCAAGTGTA---
AATTTCAAGTGGCTTN
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A C G T A A C T G A C G T A C T G A C G T C G T A A C G T A C G T A C G T
C T G A C G T A C G A T A C G T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G A G T C G C A T G A C T C G T A

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:7
Score:0.65
Offset:0
Orientation:forward strand
Alignment:TTCAAGTGTA
BTBRAGTGSN
 A C G T A C G T A G T C C G T A C G T A A C T G A C G T A C T G A C G T C G T A
A T G C G A C T A G C T C T A G C G T A C T A G C G A T C T A G A T C G G A T C

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:8
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:TTCAAGTGTA
CTYRAGTGSY
 A C G T A C G T A G T C C G T A C G T A A C T G A C G T A C T G A C G T C G T A
A T G C G C A T A G C T C T A G C G T A A C T G C G A T C T A G A T G C G A T C

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:9
Score:0.64
Offset:1
Orientation:forward strand
Alignment:TTCAAGTGTA-
-TTRAGTGSYK
 A C G T A C G T A G T C C G T A C G T A A C T G A C G T A C T G A C G T C G T A A C G T
A C G T A G C T G A C T C T A G C G T A C A T G C G A T C T A G A T C G G A C T C A G T

PB0111.1_Bhlhb2_2/Jaspar

Match Rank:10
Score:0.64
Offset:-7
Orientation:reverse strand
Alignment:-------TTCAAGTGTA------
ACCGCCNTCCACGTGTANNGACA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A C G T A A C T G A C G T A C T G A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T
C G T A G A T C G A T C C A T G T A G C G A T C G A C T C A G T T G A C G T A C C T G A A G T C T C A G G A C T A C T G A C G T G T C A C T G A G A C T T A C G C T G A G A T C C T G A