Information for 14-TTCACHTAHBTTTAGC (Motif 26)

A C G T C G A T G A T C C G T A A G T C G C T A A C G T C G T A G C T A A C T G A C G T C A G T A C G T G T C A C T A G G T A C
Reverse Opposite:
A C T G A G T C A C G T G T C A G T C A G T C A T G A C C G A T A C G T G T C A C A G T A C T G A C G T C T A G G C T A G T C A
p-value:1e-4
log p-value:-9.373e+00
Information Content per bp:1.685
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif25.00%
Number of Background Sequences with motif9.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets88.0 +/- 0.0bp
Average Position of motif in Background39.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RORA(var.2)/MA0072.1/Jaspar

Match Rank:1
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:TTCACHTAHBTTTAGC
TTGACCTANTTATN--
 A C G T C G A T G A T C C G T A A G T C G C T A A C G T C G T A G C T A A C T G A C G T C A G T A C G T G T C A C T A G G T A C
A G C T A C G T A C T G C G T A A G T C A G T C A G C T C G T A T A G C C G A T A C G T G C T A G C A T C G T A A C G T A C G T

NKX3-2/MA0122.2/Jaspar

Match Rank:2
Score:0.56
Offset:0
Orientation:forward strand
Alignment:TTCACHTAHBTTTAGC
ACCACTTAA-------
 A C G T C G A T G A T C C G T A A G T C G C T A A C G T C G T A G C T A A C T G A C G T C A G T A C G T G T C A C T A G G T A C
T C G A T A G C G A T C G C T A G T A C A G C T G A C T G C T A C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFIL3/MA0025.1/Jaspar

Match Rank:3
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--TTCACHTAHBTTTAGC
ANGTTACATAA-------
 A C G T A C G T A C G T C G A T G A T C C G T A A G T C G C T A A C G T C G T A G C T A A C T G A C G T C A G T A C G T G T C A C T A G G T A C
C G T A A G C T T C A G A G C T A C G T C G T A A G T C C T G A C G A T G T C A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Nkx3-1/MA0124.2/Jaspar

Match Rank:4
Score:0.54
Offset:0
Orientation:forward strand
Alignment:TTCACHTAHBTTTAGC
ACCACTTAA-------
 A C G T C G A T G A T C C G T A A G T C G C T A A C G T C G T A G C T A A C T G A C G T C A G T A C G T G T C A C T A G G T A C
T C G A T A G C A G T C G C T A G T A C A G C T A G C T G C T A C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:5
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:TTCACHTAHBTTTAGC
-NNACTTACCTN----
 A C G T C G A T G A T C C G T A A G T C G C T A A C G T C G T A G C T A A C T G A C G T C A G T A C G T G T C A C T A G G T A C
A C G T C T G A G A C T G C T A G A T C G C A T G A C T C G T A A G T C G A T C G C A T A C T G A C G T A C G T A C G T A C G T

FOXB1/MA0845.1/Jaspar

Match Rank:6
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---TTCACHTAHBTTTAGC
ATATTTACATA--------
 A C G T A C G T A C G T A C G T C G A T G A T C C G T A A G T C G C T A A C G T C G T A G C T A A C T G A C G T C A G T A C G T G T C A C T A G G T A C
C G T A G A C T T C G A C G A T C G A T A C G T C T G A G A T C G C T A G A C T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ISL2/MA0914.1/Jaspar

Match Rank:7
Score:0.53
Offset:1
Orientation:forward strand
Alignment:TTCACHTAHBTTTAGC
-GCACTTAA-------
 A C G T C G A T G A T C C G T A A G T C G C T A A C G T C G T A G C T A A C T G A C G T C A G T A C G T G T C A C T A G G T A C
A C G T T A C G G A T C G C T A G T A C C G A T G A C T G C T A C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

SA0003.1_at_AC_acceptor/Jaspar

Match Rank:8
Score:0.53
Offset:-12
Orientation:forward strand
Alignment:------------TTCACHTAHBTTTAGC
CCTTTACCCTTCTTCACCTT--------
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T G A T C C G T A A G T C G C T A A C G T C G T A G C T A A C T G A C G T C A G T A C G T G T C A C T A G G T A C
A G T C A G T C G A C T G C A T G C A T G C T A G A T C G A T C A G C T G A C T G C A T G A T C A G C T A G C T G A T C C G T A A G T C G A T C A G C T C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PH0115.1_Nkx2-6/Jaspar

Match Rank:9
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---TTCACHTAHBTTTAGC
TAAGCCACTTAACATT---
 A C G T A C G T A C G T A C G T C G A T G A T C C G T A A G T C G C T A A C G T C G T A G C T A A C T G A C G T C A G T A C G T G T C A C T A G G T A C
C A G T C T G A C T G A C A T G T A G C A G T C C G T A G T A C A C G T A G C T C T G A C G T A T G A C G C T A G A C T G A C T A C G T A C G T A C G T

PB0048.1_Nkx3-1_1/Jaspar

Match Rank:10
Score:0.52
Offset:-4
Orientation:forward strand
Alignment:----TTCACHTAHBTTTAGC
CTTAACCACTTAAGGAT---
 A C G T A C G T A C G T A C G T A C G T C G A T G A T C C G T A A G T C G C T A A C G T C G T A G C T A A C T G A C G T C A G T A C G T G T C A C T A G G T A C
G T A C G C A T C G A T T C G A C T G A T A G C A G T C C G T A G T A C A C G T A G C T C G T A C G T A T A C G A C T G T C G A A C G T A C G T A C G T A C G T