Information for 13-TTCCAGACAAATA (Motif 16)

A C G T A C G T A G T C A G T C C G T A A C T G C G T A A G T C C G T A C G T A C G T A A C G T C G T A
Reverse Opposite:
A C G T C G T A A C G T A C G T A C G T A C T G A C G T A G T C A C G T A C T G A C T G C G T A C G T A
p-value:1e-5
log p-value:-1.157e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif25.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets79.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Stat6/MA0520.1/Jaspar

Match Rank:1
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---TTCCAGACAAATA
CATTTCCTGAGAAAT-
 A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G T A A C T G C G T A A G T C C G T A C G T A C G T A A C G T C G T A
A T G C C G T A A G C T A C G T C G A T G T A C G A T C C G A T T A C G C T G A C A T G C G T A C T G A T G C A G A C T A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:2
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---TTCCAGACAAATA-
CAAATCCAGACATCACA
 A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G T A A C T G C G T A A G T C C G T A C G T A C G T A A C G T C G T A A C G T
G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:3
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-TTCCAGACAAATA
ATGCCAGACN----
 A C G T A C G T A C G T A G T C A G T C C G T A A C T G C G T A A G T C C G T A C G T A C G T A A C G T C G T A
C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C A C G T A C G T A C G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:TTCCAGACAAATA
--CCAGACAG---
 A C G T A C G T A G T C A G T C C G T A A C T G C G T A A G T C C G T A C G T A C G T A A C G T C G T A
A C G T A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T A C G T A C G T

E2F8/MA0865.1/Jaspar

Match Rank:5
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-TTCCAGACAAATA
TTTCCCGCCAAA--
 A C G T A C G T A C G T A G T C A G T C C G T A A C T G C G T A A G T C C G T A C G T A C G T A A C G T C G T A
G A C T A G C T A C G T A G T C A G T C A T G C T A C G A G T C T A G C C T G A C G T A G C T A A C G T A C G T

E2F7/MA0758.1/Jaspar

Match Rank:6
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--TTCCAGACAAATA
TTTTCCCGCCAAAA-
 A C G T A C G T A C G T A C G T A G T C A G T C C G T A A C T G C G T A A G T C C G T A C G T A C G T A A C G T C G T A
C G A T C G A T A G C T A G C T A T G C A T G C A G T C T C A G A G T C A T G C C G T A C G T A G C T A C G T A A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:7
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:TTCCAGACAAATA
--BCAGACWA---
 A C G T A C G T A G T C A G T C C G T A A C T G C G T A A G T C C G T A C G T A C G T A A C G T C G T A
A C G T A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T A C G T A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:8
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:TTCCAGACAAATA
--CCAGACRSVB-
 A C G T A C G T A G T C A G T C C G T A A C T G C G T A A G T C C G T A C G T A C G T A A C G T C G T A
A C G T A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C A C G T

STAT6(Stat)/Macrophage-Stat6-ChIP-Seq(GSE38377)/Homer

Match Rank:9
Score:0.62
Offset:0
Orientation:forward strand
Alignment:TTCCAGACAAATA
TTCCKNAGAA---
 A C G T A C G T A G T C A G T C C G T A A C T G C G T A A G T C C G T A C G T A C G T A A C G T C G T A
G A C T C A G T G A T C G A T C A C G T G A T C C T G A T A C G C G T A G T C A A C G T A C G T A C G T

STAT6(Stat)/CD4-Stat6-ChIP-Seq(GSE22104)/Homer

Match Rank:10
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:TTCCAGACAAATA
TTCTNNAGAANT-
 A C G T A C G T A G T C A G T C C G T A A C T G C G T A A G T C C G T A C G T A C G T A A C G T C G T A
A C G T A C G T A G T C G A C T A G C T C T G A C T G A C T A G C G T A C G T A T C G A G A C T A C G T