Information for 10-AGTTTCATTCAAA (Motif 13)

C G T A A C T G A C G T A C G T A C G T A G T C C G T A A C G T A C G T A G T C C G T A C G T A C G T A
Reverse Opposite:
A C G T A C G T A C G T A C T G C G T A C G T A A C G T A C T G C G T A C G T A C G T A A G T C A C G T
p-value:1e-5
log p-value:-1.157e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif25.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets25.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0028.1_Hbp1_1/Jaspar

Match Rank:1
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-AGTTTCATTCAAA--
NNCATTCATTCATNNN
 A C G T C G T A A C T G A C G T A C G T A C G T A G T C C G T A A C G T A C G T A G T C C G T A C G T A C G T A A C G T A C G T
T C G A G A C T G T A C C G T A A G C T G A C T T G A C C G T A C G A T G C A T A T G C C G T A C G A T G C T A A C T G C G A T

LIN54/MA0619.1/Jaspar

Match Rank:2
Score:0.67
Offset:5
Orientation:reverse strand
Alignment:AGTTTCATTCAAA-
-----NATTCAAAT
 C G T A A C T G A C G T A C G T A C G T A G T C C G T A A C G T A C G T A G T C C G T A C G T A C G T A A C G T
A C G T A C G T A C G T A C G T A C G T C T G A C T G A A C G T A C G T A G T C C T G A C G T A C G T A G C A T

PB0169.1_Sox15_2/Jaspar

Match Rank:3
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---AGTTTCATTCAAA
TNGAATTTCATTNAN-
 A C G T A C G T A C G T C G T A A C T G A C G T A C G T A C G T A G T C C G T A A C G T A C G T A G T C C G T A C G T A C G T A
A G C T A T G C C T A G C T G A G T C A G A C T C A G T G C A T T G A C C T G A C A G T G A C T A G T C T G C A T G C A A C G T

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-AGTTTCATTCAAA
TGGTTTCAGT----
 A C G T C G T A A C T G A C G T A C G T A C G T A G T C C G T A A C G T A C G T A G T C C G T A C G T A C G T A
G A C T C T A G T A C G C G A T G C A T A C G T T A G C T C G A A T C G C G A T A C G T A C G T A C G T A C G T

PB0001.1_Arid3a_1/Jaspar

Match Rank:5
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-AGTTTCATTCAAA---
GGGTTTAATTAAAATTC
 A C G T C G T A A C T G A C G T A C G T A C G T A G T C C G T A A C G T A C G T A G T C C G T A C G T A C G T A A C G T A C G T A C G T
T A C G A C T G A C T G G C A T G A C T A G C T C T G A C G T A C G A T G A C T T C G A C T G A C G T A G T C A G A C T G C A T G A T C

PB0005.1_Bbx_1/Jaspar

Match Rank:6
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:AGTTTCATTCAAA--
NANTTCATTGAATTA
 C G T A A C T G A C G T A C G T A C G T A G T C C G T A A C G T A C G T A G T C C G T A C G T A C G T A A C G T A C G T
G A T C C G T A T A G C C G A T C G A T T G A C G C T A G C A T C G A T A C T G C G T A G C T A G A C T C G A T C G T A

bZIP:IRF(bZIP,IRF)/Th17-BatF-ChIP-Seq(GSE39756)/Homer

Match Rank:7
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-AGTTTCATTCAAA----
NAGTTTCABTHTGACTNW
 A C G T C G T A A C T G A C G T A C G T A C G T A G T C C G T A A C G T A C G T A G T C C G T A C G T A C G T A A C G T A C G T A C G T A C G T
A G T C C T G A A T C G A G C T A G C T G A C T A G T C G C T A A C G T C G A T G C A T C G A T A T C G C G T A T A G C G C A T A T G C C G T A

PB0036.1_Irf6_1/Jaspar

Match Rank:8
Score:0.58
Offset:-5
Orientation:reverse strand
Alignment:-----AGTTTCATTCAAA
NNNTTGGTTTCGNTNNN-
 A C G T A C G T A C G T A C G T A C G T C G T A A C T G A C G T A C G T A C G T A G T C C G T A A C G T A C G T A G T C C G T A C G T A C G T A
G C T A G T A C G C A T A C G T A G C T C T A G A C T G A C G T G C A T A C G T A G T C C T A G C T G A G A C T G A T C G C T A C A T G A C G T

OCT4-SOX2-TCF-NANOG(POU,Homeobox,HMG)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-AGTTTCATTCAAA-
CATTGTTATGCAAAT
 A C G T C G T A A C T G A C G T A C G T A C G T A G T C C G T A A C G T A C G T A G T C C G T A C G T A C G T A A C G T
G A T C G C T A G A C T C G A T A T C G C G A T G A C T C G T A C G A T C A T G A G T C C G T A C T G A C G T A C G A T

PB0035.1_Irf5_1/Jaspar

Match Rank:10
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--AGTTTCATTCAAA
NTGGTTTCGGTTNNN
 A C G T A C G T C G T A A C T G A C G T A C G T A C G T A G T C C G T A A C G T A C G T A G T C C G T A C G T A C G T A
A G C T G A C T C T A G A C T G A C G T G C A T A G C T A G T C C T A G C T A G G A C T G C A T G A C T G C T A C G A T