Information for 5-TGAATTCAAG (Motif 9)

A G C T A C T G C G T A C G T A A C G T A C G T A G T C C T G A C G T A C T A G
Reverse Opposite:
A G T C A C G T A G C T A C T G C G T A C G T A A C G T A C G T A G T C C T G A
p-value:1e-2
log p-value:-5.444e+00
Information Content per bp:1.905
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif3.45%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets21.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0171.1_Sox18_2/Jaspar

Match Rank:1
Score:0.79
Offset:-4
Orientation:forward strand
Alignment:----TGAATTCAAG--
GGACTGAATTCATGCC
 A C G T A C G T A C G T A C G T A G C T A C T G C G T A C G T A A C G T A C G T A G T C C T G A C G T A C T A G A C G T A C G T
C T A G A C T G C T G A A T G C A G C T C T A G G T C A C T G A G A C T C A G T G A T C T C G A C G A T C T A G G T A C T G A C

LIN54/MA0619.1/Jaspar

Match Rank:2
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:TGAATTCAAG-
--NATTCAAAT
 A G C T A C T G C G T A C G T A A C G T A C G T A G T C C T G A C G T A C T A G A C G T
A C G T A C G T C T G A C T G A A C G T A C G T A G T C C T G A C G T A C G T A G C A T

PB0068.1_Sox1_1/Jaspar

Match Rank:3
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--TGAATTCAAG----
AATCAATTCAATAATT
 A C G T A C G T A G C T A C T G C G T A C G T A A C G T A C G T A G T C C T G A C G T A C T A G A C G T A C G T A C G T A C G T
G C A T C G T A C A G T G A T C G C T A G C T A G C A T C G A T T A G C G C T A G C T A G C A T C G T A G T C A C G A T A C G T

TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer

Match Rank:4
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:TGAATTCAAG-
-GCATTCCAGN
 A G C T A C T G C G T A C G T A A C G T A C G T A G T C C T G A C G T A C T A G A C G T
A C G T C T A G T G A C C G T A A C G T A C G T A G T C A G T C C G T A C A T G C T A G

Nr2e1/MA0676.1/Jaspar

Match Rank:5
Score:0.62
Offset:0
Orientation:forward strand
Alignment:TGAATTCAAG
AAAAGTCAA-
 A G C T A C T G C G T A C G T A A C G T A C G T A G T C C T G A C G T A C T A G
G C T A C T G A C T G A C T G A C T A G A G C T A G T C C G T A G C T A A C G T

PH0037.1_Hdx/Jaspar

Match Rank:6
Score:0.62
Offset:-5
Orientation:reverse strand
Alignment:-----TGAATTCAAG--
TNNNATGATTTCNNCNN
 A C G T A C G T A C G T A C G T A C G T A G C T A C T G C G T A C G T A A C G T A C G T A G T C C T G A C G T A C T A G A C G T A C G T
A C G T C A T G T A G C C T A G C T G A C G A T A T C G G T C A G C A T G C A T A C G T G A T C C A T G G T A C T G A C G A C T G C A T

PB0178.1_Sox8_2/Jaspar

Match Rank:7
Score:0.62
Offset:1
Orientation:forward strand
Alignment:TGAATTCAAG-----
-ACATTCATGACACG
 A G C T A C T G C G T A C G T A A C G T A C G T A G T C C T G A C G T A C T A G A C G T A C G T A C G T A C G T A C G T
A C G T C G T A G A T C G C T A A C G T C G A T G A T C T C G A A C G T C T A G G C T A G T A C G T C A A T G C T A C G

TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer

Match Rank:8
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:TGAATTCAAG-
-RCATTCCWGG
 A G C T A C T G C G T A C G T A A C G T A C G T A G T C C T G A C G T A C T A G A C G T
A C G T C T A G T G A C C G T A C G A T C G A T A G T C G T A C C G T A A T C G A T C G

TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer

Match Rank:9
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:TGAATTCAAG-
-RCATTCCWGG
 A G C T A C T G C G T A C G T A A C G T A C G T A G T C C T G A C G T A C T A G A C G T
A C G T C T G A T G A C C T G A A C G T C G A T A G T C A G T C G C T A C T A G T A C G

PAX4/MA0068.2/Jaspar

Match Rank:10
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:TGAATTCAAG
CTAATTAG--
 A G C T A C T G C G T A C G T A A C G T A C G T A G T C C T G A C G T A C T A G
A G T C C A G T C G T A G T C A A C G T C G A T G T C A T C A G A C G T A C G T