Information for 4-GCAAAGRYACANACAC (Motif 4)

C A T G G A T C C G T A C T G A C G T A C A T G C T A G A G T C C G T A G T A C C G T A A G C T C T G A G A T C C G T A G T A C
Reverse Opposite:
A C T G C G A T C A T G A G C T C T G A A C G T C A T G A C G T T C A G G A T C G T A C C G A T G A C T A C G T C A T G G A T C
p-value:1e-5
log p-value:-1.287e+01
Information Content per bp:1.705
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif10.34%
Number of Background Sequences with motif6.6
Percentage of Background Sequences with motif0.10%
Average Position of motif in Targets30.5 +/- 13.7bp
Average Position of motif in Background60.4 +/- 22.0bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0130.1_Gm397_2/Jaspar

Match Rank:1
Score:0.65
Offset:2
Orientation:forward strand
Alignment:GCAAAGRYACANACAC--
--AGCGGCACACACGCAA
 C A T G G A T C C G T A C T G A C G T A C A T G C T A G A G T C C G T A G T A C C G T A A G C T C T G A G A T C C G T A G T A C A C G T A C G T
A C G T A C G T C T G A T C A G G T A C T C A G C T A G T G A C C T G A G A T C T C G A A T G C T G C A G T A C A C T G G A T C T G C A G T C A

FOXP1/MA0481.1/Jaspar

Match Rank:2
Score:0.59
Offset:1
Orientation:forward strand
Alignment:GCAAAGRYACANACAC
-CAAAAGTAAACAAAG
 C A T G G A T C C G T A C T G A C G T A C A T G C T A G A G T C C G T A G T A C C G T A A G C T C T G A G A T C C G T A G T A C
A C G T G T A C G C T A C G T A T C G A C T G A T C A G G C A T C G T A C G T A C G T A T G A C C G T A T G C A C G T A T C A G

PB0015.1_Foxa2_1/Jaspar

Match Rank:3
Score:0.56
Offset:1
Orientation:forward strand
Alignment:GCAAAGRYACANACAC--
-AAAAAGTAAACAAAGAC
 C A T G G A T C C G T A C T G A C G T A C A T G C T A G A G T C C G T A G T A C C G T A A G C T C T G A G A T C C G T A G T A C A C G T A C G T
A C G T G C T A C G T A G C T A C G T A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A G C T A C G T A T A C G C T G A A G T C

Foxj3/MA0851.1/Jaspar

Match Rank:4
Score:0.56
Offset:1
Orientation:forward strand
Alignment:GCAAAGRYACANACAC--
-AAAAAGTAAACAAACAC
 C A T G G A T C C G T A C T G A C G T A C A T G C T A G A G T C C G T A G T A C C G T A A G C T C T G A G A T C C G T A G T A C A C G T A C G T
A C G T G C T A C T G A G T C A C G T A C T G A T C A G G A C T G T C A G C T A C G T A A G T C C G T A G C T A G C T A T A G C T G A C G T A C

PB0017.1_Foxj3_1/Jaspar

Match Rank:5
Score:0.56
Offset:1
Orientation:forward strand
Alignment:GCAAAGRYACANACAC--
-AAAAAGTAAACAAACAC
 C A T G G A T C C G T A C T G A C G T A C A T G C T A G A G T C C G T A G T A C C G T A A G C T C T G A G A T C C G T A G T A C A C G T A C G T
A C G T G C T A C T G A G T C A C G T A C T G A T C A G G A C T G T C A G C T A C G T A A G T C C G T A G C T A G C T A T A G C T G A C G T A C

FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer

Match Rank:6
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:GCAAAGRYACANACAC
---WAAGTAAAYA---
 C A T G G A T C C G T A C T G A C G T A C A T G C T A G A G T C C G T A G T A C C G T A A G C T C T G A G A T C C G T A G T A C
A C G T A C G T A C G T G C A T T C G A C T G A T C A G A G C T G T C A G T C A C T G A A G T C T G C A A C G T A C G T A C G T

Foxk1/MA0852.1/Jaspar

Match Rank:7
Score:0.55
Offset:1
Orientation:forward strand
Alignment:GCAAAGRYACANACAC--
-AAAATGTAAACAAACAG
 C A T G G A T C C G T A C T G A C G T A C A T G C T A G A G T C C G T A G T A C C G T A A G C T C T G A G A T C C G T A G T A C A C G T A C G T
A C G T C G T A C T G A C G T A C G T A A C G T T C A G C G A T G T C A G C T A C G T A A G T C C G T A G C T A C G T A T A G C T C G A A T C G

PB0018.1_Foxk1_1/Jaspar

Match Rank:8
Score:0.55
Offset:1
Orientation:forward strand
Alignment:GCAAAGRYACANACAC--
-AAAATGTAAACAAACAG
 C A T G G A T C C G T A C T G A C G T A C A T G C T A G A G T C C G T A G T A C C G T A A G C T C T G A G A T C C G T A G T A C A C G T A C G T
A C G T C G T A C T G A C G T A C G T A A C G T T C A G C G A T G T C A G C T A C G T A A G T C C G T A G C T A C G T A T A G C T C G A A T C G

PB0208.1_Zscan4_2/Jaspar

Match Rank:9
Score:0.54
Offset:2
Orientation:forward strand
Alignment:GCAAAGRYACANACAC--
--CGAAGCACACAAAATA
 C A T G G A T C C G T A C T G A C G T A C A T G C T A G A G T C C G T A G T A C C G T A A G C T C T G A G A T C C G T A G T A C A C G T A C G T
A C G T A C G T G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:10
Score:0.54
Offset:3
Orientation:forward strand
Alignment:GCAAAGRYACANACAC
---AAAGTAAACA---
 C A T G G A T C C G T A C T G A C G T A C A T G C T A G A G T C C G T A G T A C C G T A A G C T C T G A G A T C C G T A G T A C
A C G T A C G T A C G T G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A A C G T A C G T A C G T