Information for 1-TGSWGCKSGKRTM (Motif 3)

A C G T A C T G A T C G G C A T A C T G A G T C A C G T A T C G A C T G A C T G C T A G A C G T G T C A
Reverse Opposite:
A C G T C G T A A G T C G T A C A G T C A T G C G T C A A C T G A G T C C G A T A T G C A G T C C G T A
p-value:1e-7
log p-value:-1.823e+01
Information Content per bp:1.796
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif10.34%
Number of Background Sequences with motif0.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets56.4 +/- 30.2bp
Average Position of motif in Background30.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.67
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0095.1_Zfp161_1/Jaspar

Match Rank:1
Score:0.54
Offset:0
Orientation:forward strand
Alignment:TGSWGCKSGKRTM---
TGGCGCGCGCGCCTGA
 A C G T A C T G A T C G G C A T A C T G A G T C A C G T A T C G A C T G A C T G C T A G A C G T G T C A A C G T A C G T A C G T
C A G T C T A G C T A G A T G C T C A G G A T C C T A G A G T C C T A G A G T C C T A G G A T C G A T C G A C T C T A G C G T A

GCM2/MA0767.1/Jaspar

Match Rank:2
Score:0.51
Offset:1
Orientation:forward strand
Alignment:TGSWGCKSGKRTM
-TATGCGGGTA--
 A C G T A C T G A T C G G C A T A C T G A G T C A C G T A T C G A C T G A C T G C T A G A C G T G T C A
A C G T A C G T T C G A A G C T T C A G A T G C C A T G A C T G C T A G G A C T C T G A A C G T A C G T

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.50
Offset:-5
Orientation:forward strand
Alignment:-----TGSWGCKSGKRTM
GRTGMTRGAGCC------
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A T C G G C A T A C T G A G T C A C G T A T C G A C T G A C T G C T A G A C G T G T C A
A T C G T C G A G A C T A T C G T G A C A C G T C T A G A C T G C G T A A C T G A G T C G T A C A C G T A C G T A C G T A C G T A C G T A C G T

Rfx6(HTH)/Min6b1-Rfx6.HA-ChIP-Seq(GSE62844)/Homer

Match Rank:4
Score:0.50
Offset:0
Orientation:reverse strand
Alignment:TGSWGCKSGKRTM--
KGTTGCTAGGMAACA
 A C G T A C T G A T C G G C A T A C T G A G T C A C G T A T C G A C T G A C T G C T A G A C G T G T C A A C G T A C G T
C A T G A C T G A G C T C G A T C T A G A G T C A G C T C T G A C T A G A C T G T G C A C T G A T C G A A G T C G T C A

PB0110.1_Bcl6b_2/Jaspar

Match Rank:5
Score:0.50
Offset:-4
Orientation:reverse strand
Alignment:----TGSWGCKSGKRTM
NNTNAGGGGCGGNNNN-
 A C G T A C G T A C G T A C G T A C G T A C T G A T C G G C A T A C T G A G T C A C G T A T C G A C T G A C T G C T A G A C G T G T C A
A C G T C G A T C A G T C A G T G C T A T A C G T A C G A C T G C A T G G A T C C T A G C T A G T A C G T A C G T C G A C A G T A C G T

PB0107.1_Ascl2_2/Jaspar

Match Rank:6
Score:0.50
Offset:-2
Orientation:reverse strand
Alignment:--TGSWGCKSGKRTM-
NATNGGGNGGGGANAN
 A C G T A C G T A C G T A C T G A T C G G C A T A C T G A G T C A C G T A T C G A C T G A C T G C T A G A C G T G T C A A C G T
C T G A T G C A G A C T T C G A C T A G C T A G T C A G G A T C A C T G C A T G A T C G C A T G G C T A A C G T C T G A T A C G

POL013.1_MED-1/Jaspar

Match Rank:7
Score:0.50
Offset:0
Orientation:reverse strand
Alignment:TGSWGCKSGKRTM
CGGAGC-------
 A C G T A C T G A T C G G C A T A C T G A G T C A C G T A T C G A C T G A C T G C T A G A C G T G T C A
A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0024.1_Gcm1_1/Jaspar

Match Rank:8
Score:0.49
Offset:-2
Orientation:reverse strand
Alignment:--TGSWGCKSGKRTM-
NNNNATGCGGGTNNNN
 A C G T A C G T A C G T A C T G A T C G G C A T A C T G A G T C A C G T A T C G A C T G A C T G C T A G A C G T G T C A A C G T
G T C A C T G A G C A T A C T G T C G A G A C T T C A G A T G C C A T G A C T G A C T G A G C T C G T A A G T C A C T G C G T A

POL010.1_DCE_S_III/Jaspar

Match Rank:9
Score:0.49
Offset:3
Orientation:reverse strand
Alignment:TGSWGCKSGKRTM
---NGCTN-----
 A C G T A C T G A T C G G C A T A C T G A G T C A C G T A T C G A C T G A C T G C T A G A C G T G T C A
A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T A C G T

PB0091.1_Zbtb3_1/Jaspar

Match Rank:10
Score:0.49
Offset:-5
Orientation:reverse strand
Alignment:-----TGSWGCKSGKRTM
NNNANTGCAGTGCNNTT-
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A T C G G C A T A C T G A G T C A C G T A T C G A C T G A C T G C T A G A C G T G T C A
T G A C T A C G T A C G T G C A T C G A A C G T T A C G G T A C C G T A A T C G A G C T C A T G T A G C T A C G T C G A G A C T G A C T A C G T