Information for 1-TTTDCVATCACABGTT (Motif 2)

A C G T A C G T A C G T C G A T A T G C T C G A C G T A C G A T G T A C C G T A A G T C C G T A A G T C A T C G G A C T A C G T
Reverse Opposite:
C G T A C T G A T A G C T A C G C G A T A C T G A C G T A C T G C G T A C G A T A C G T A T C G G C T A G T C A G T C A C G T A
p-value:1e-10
log p-value:-2.421e+01
Information Content per bp:1.732
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif4.65%
Number of Background Sequences with motif3.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets59.0 +/- 26.1bp
Average Position of motif in Background36.9 +/- 20.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TBX21/MA0690.1/Jaspar

Match Rank:1
Score:0.58
Offset:6
Orientation:reverse strand
Alignment:TTTDCVATCACABGTT
------TTCACACCTT
 A C G T A C G T A C G T C G A T A T G C T C G A C G T A C G A T G T A C C G T A A G T C C G T A A G T C A T C G G A C T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G A T A G C T T G A C C T G A G T A C T C G A T G A C G A T C G A C T G A C T

Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer

Match Rank:2
Score:0.57
Offset:6
Orientation:reverse strand
Alignment:TTTDCVATCACABGTT
------TTMACACCTT
 A C G T A C G T A C G T C G A T A T G C T C G A C G T A C G A T G T A C C G T A A G T C C G T A A G T C A T C G G A C T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C A G T G A C T G T A C C T G A A T G C T C G A T A G C G T A C G A C T G A C T

TBX20/MA0689.1/Jaspar

Match Rank:3
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:TTTDCVATCACABGTT
-----CTTCACACCTA
 A C G T A C G T A C G T C G A T A T G C T C G A C G T A C G A T G T A C C G T A A G T C C G T A A G T C A T C G G A C T A C G T
A C G T A C G T A C G T A C G T A C G T A G T C G C A T G C A T G T A C G T C A T G A C G T C A G T A C A G T C G A C T G C T A

MGA/MA0801.1/Jaspar

Match Rank:4
Score:0.55
Offset:7
Orientation:reverse strand
Alignment:TTTDCVATCACABGTT
-------TCACACCT-
 A C G T A C G T A C G T C G A T A T G C T C G A C G T A C G A T G T A C C G T A A G T C C G T A A G T C A T C G G A C T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T T G A C C T G A G A T C T C G A T A G C A G T C G A C T A C G T

NFAT5/MA0606.1/Jaspar

Match Rank:5
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-TTTDCVATCACABGTT
ATTTTCCATT-------
 A C G T A C G T A C G T A C G T C G A T A T G C T C G A C G T A C G A T G T A C C G T A A G T C C G T A A G T C A T C G G A C T A C G T
C G T A C G A T A C G T A C G T G C A T A G T C A G T C G C T A G A C T C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

TBX1/MA0805.1/Jaspar

Match Rank:6
Score:0.54
Offset:7
Orientation:reverse strand
Alignment:TTTDCVATCACABGTT
-------TCACACCT-
 A C G T A C G T A C G T C G A T A T G C T C G A C G T A C G A T G T A C C G T A A G T C C G T A A G T C A T C G G A C T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G A C C T G A A T G C T C G A A G T C A G T C G A C T A C G T

EOMES/MA0800.1/Jaspar

Match Rank:7
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:TTTDCVATCACABGTT
---NTTTTCACACCTT
 A C G T A C G T A C G T C G A T A T G C T C G A C G T A C G A T G T A C C G T A A G T C C G T A A G T C A T C G G A C T A C G T
A C G T A C G T A C G T C T G A G C A T C A G T C G A T A G C T T G A C C T G A A G T C T C G A T G A C G A T C G A C T G A C T

TBX2/MA0688.1/Jaspar

Match Rank:8
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:TTTDCVATCACABGTT
-----TTTCACACCTN
 A C G T A C G T A C G T C G A T A T G C T C G A C G T A C G A T G T A C C G T A A G T C C G T A A G T C A T C G G A C T A C G T
A C G T A C G T A C G T A C G T A C G T G C A T G C A T G A C T T G A C C T G A G A T C T C G A T A G C A G T C G A C T G C A T

TBX15/MA0803.1/Jaspar

Match Rank:9
Score:0.53
Offset:7
Orientation:reverse strand
Alignment:TTTDCVATCACABGTT
-------TCACACCT-
 A C G T A C G T A C G T C G A T A T G C T C G A C G T A C G A T G T A C C G T A A G T C C G T A A G T C A T C G G A C T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T T G A C T C G A A T G C T G C A A G T C G A T C G A C T A C G T

TBX4/MA0806.1/Jaspar

Match Rank:10
Score:0.53
Offset:7
Orientation:reverse strand
Alignment:TTTDCVATCACABGTT
-------TCACACCT-
 A C G T A C G T A C G T C G A T A T G C T C G A C G T A C G A T G T A C C G T A A G T C C G T A A G T C A T C G G A C T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T T G A C C T G A A G T C T C G A A T G C A G T C G A C T A C G T