Information for 8-AGTTTATGGG (Motif 27)

C G T A A C T G A C G T A C G T A G C T C T G A A C G T C T A G C A T G A T C G
Reverse Opposite:
A T G C G T A C A G T C C G T A G A C T C T G A C G T A G T C A G T A C A C G T
p-value:1e-8
log p-value:-1.959e+01
Information Content per bp:1.844
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.40%
Number of Background Sequences with motif64.7
Percentage of Background Sequences with motif0.13%
Average Position of motif in Targets55.8 +/- 22.8bp
Average Position of motif in Background51.5 +/- 25.7bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer

Match Rank:1
Score:0.75
Offset:1
Orientation:forward strand
Alignment:AGTTTATGGG-
-TTTTATKRGG
 C G T A A C T G A C G T A C G T A G C T C T G A A C G T C T A G C A T G A T C G A C G T
A C G T C G A T A C G T A C G T A C G T C G T A A G C T C A G T C T A G A T C G A C T G

HOXB13/MA0901.1/Jaspar

Match Rank:2
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:AGTTTATGGG
NTTTTATTGG
 C G T A A C T G A C G T A C G T A G C T C T G A A C G T C T A G C A T G A T C G
C A T G C A G T C A G T C G A T G C A T C T G A G C A T C A G T C T A G A T C G

HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer

Match Rank:3
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:AGTTTATGGG-
-TTTTATTRGN
 C G T A A C T G A C G T A C G T A G C T C T G A A C G T C T A G C A T G A T C G A C G T
A C G T C G A T A C G T A C G T C G A T C G T A G C A T C A G T C T G A A T C G G C T A

HOXA13/MA0650.1/Jaspar

Match Rank:4
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:AGTTTATGGG
TTTTTATTGG
 C G T A A C T G A C G T A C G T A G C T C T G A A C G T C T A G C A T G A T C G
C A G T A C G T A C G T C G A T C G A T C G T A C G A T C A G T T C A G A T C G

HOXD13/MA0909.1/Jaspar

Match Rank:5
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:AGTTTATGGG
NTTTTATTGG
 C G T A A C T G A C G T A C G T A G C T C T G A A C G T C T A G C A T G A T C G
C A G T C A G T A C G T C G A T C G A T C T G A G C A T C A G T C T A G T A C G

CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer

Match Rank:6
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-AGTTTATGGG-
DGWTTTATGRCN
 A C G T C G T A A C T G A C G T A C G T A G C T C T G A A C G T C T A G C A T G A T C G A C G T
C A G T C A T G G C A T C G A T C G A T C G A T C T G A A G C T C A T G C T A G A G T C A T G C

CDX1/MA0878.1/Jaspar

Match Rank:7
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:AGTTTATGGG
-TTTTATTGC
 C G T A A C T G A C G T A C G T A G C T C T G A A C G T C T A G C A T G A T C G
A C G T C A G T C G A T G C A T C G A T C G T A A G C T C A G T C T A G A G T C

PH0057.1_Hoxb13/Jaspar

Match Rank:8
Score:0.69
Offset:-3
Orientation:reverse strand
Alignment:---AGTTTATGGG---
NNAATTTTATTGGNTN
 A C G T A C G T A C G T C G T A A C T G A C G T A C G T A G C T C T G A A C G T C T A G C A T G A T C G A C G T A C G T A C G T
A T G C C T A G C G T A C G T A A C G T C G A T C G A T G C A T C T G A G A C T C A G T C T A G T A C G C A T G G A C T A C G T

CDX2/MA0465.1/Jaspar

Match Rank:9
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:AGTTTATGGG--
-TTTTATGGCTN
 C G T A A C T G A C G T A C G T A G C T C T G A A C G T C T A G C A T G A T C G A C G T A C G T
A C G T A G C T A C G T A C G T A C G T C G T A A C G T C A T G C T A G A G T C G A C T A G C T

PH0078.1_Hoxd13/Jaspar

Match Rank:10
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---AGTTTATGGG---
NNANTTTTATTGGNNN
 A C G T A C G T A C G T C G T A A C T G A C G T A C G T A G C T C T G A A C G T C T A G C A T G A T C G A C G T A C G T A C G T
C G T A C A T G C T G A C T G A C A G T C G A T C G A T G C A T C T G A G A C T C G A T C T A G T C A G C G A T G C T A C A T G