Information for 3-GCSAAAGTGY (Motif 7)

A C T G A G T C A T G C C G T A C G T A C G T A A C T G C G A T A C T G A G C T
Reverse Opposite:
C T G A A G T C C G T A A G T C A C G T A C G T A C G T A T C G C T A G A G T C
p-value:1e-7
log p-value:-1.812e+01
Information Content per bp:1.857
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif4.35%
Number of Background Sequences with motif12.9
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets50.5 +/- 26.4bp
Average Position of motif in Background46.6 +/- 24.7bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.71
Offset:-4
Orientation:reverse strand
Alignment:----GCSAAAGTGY
GAAAGTGAAAGT--
 A C G T A C G T A C G T A C G T A C T G A G T C A T G C C G T A C G T A C G T A A C T G C G A T A C T G A G C T
T C A G C G T A T G C A C T G A C T A G C G A T C T A G G C T A T C G A C G T A A C T G A G C T A C G T A C G T

PRDM1/MA0508.1/Jaspar

Match Rank:2
Score:0.70
Offset:-5
Orientation:forward strand
Alignment:-----GCSAAAGTGY
AGAAAGTGAAAGTGA
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C A T G C C G T A C G T A C G T A A C T G C G A T A C T G A G C T
C G T A C T A G C T G A T C G A C T G A C T A G C A G T C T A G C G T A C T G A C G T A T C A G A C G T C T A G C T G A

Hnf4a/MA0114.3/Jaspar

Match Rank:3
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---GCSAAAGTGY---
GGGGTCAAAGTCCAAT
 A C G T A C G T A C G T A C T G A G T C A T G C C G T A C G T A C G T A A C T G C G A T A C T G A G C T A C G T A C G T A C G T
T C A G T C A G C T A G C A T G C A G T A G T C T C G A C T G A C T G A A C T G A C G T A G T C A G T C C T G A T C G A G A C T

HNF4G/MA0484.1/Jaspar

Match Rank:4
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----GCSAAAGTGY-
AGAGTCCAAAGTCCA
 A C G T A C G T A C G T A C G T A C T G A G T C A T G C C G T A C G T A C G T A A C T G C G A T A C T G A G C T A C G T
C G T A T C A G C T G A C T A G C A G T A G T C A G T C T G C A T C G A C T G A C A T G C A G T A G T C G A T C G C T A

ETV6/MA0645.1/Jaspar

Match Rank:5
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-GCSAAAGTGY
AGCGGAAGTG-
 A C G T A C T G A G T C A T G C C G T A C G T A C G T A A C T G C G A T A C T G A G C T
T G C A A T C G T G A C C A T G C A T G C T G A C G T A T C A G A G C T C T A G A C G T

NKX3-2/MA0122.2/Jaspar

Match Rank:6
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:GCSAAAGTGY-
--TTAAGTGGN
 A C T G A G T C A T G C C G T A C G T A C G T A A C T G C G A T A C T G A G C T A C G T
A C G T A C G T G A C T C G A T C T G A T C G A C A T G C G A T C T A G A T C G A G C T

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:7
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----GCSAAAGTGY-
CANAGNNCAAAGTCCA
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C A T G C C G T A C G T A C G T A A C T G C G A T A C T G A G C T A C G T
G T A C G C T A T C A G C T G A C T A G C A T G A G C T G A T C T G C A T C G A C T G A A C T G C A G T A G T C G A T C G C T A

ISL2/MA0914.1/Jaspar

Match Rank:8
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:GCSAAAGTGY
--TTAAGTGC
 A C T G A G T C A T G C C G T A C G T A C G T A A C T G C G A T A C T G A G C T
A C G T A C G T G A C T C G A T C T G A G C T A C A T G C G A T C T A G A T G C

NKX2-3/MA0672.1/Jaspar

Match Rank:9
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:GCSAAAGTGY-
-NTCAAGTGGN
 A C T G A G T C A T G C C G T A C G T A C G T A A C T G C G A T A C T G A G C T A C G T
A C G T A G C T G C A T A G T C C T G A G T C A A C T G C G A T C T A G A T C G A C G T

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:10
Score:0.61
Offset:2
Orientation:forward strand
Alignment:GCSAAAGTGY--
--TTRAGTGSYK
 A C T G A G T C A T G C C G T A C G T A C G T A A C T G C G A T A C T G A G C T A C G T A C G T
A C G T A C G T A G C T G A C T C T A G C G T A C A T G C G A T C T A G A T C G G A C T C A G T