Information for 2-GACTAGATDCCVATHA (Motif 2)

A C T G C G T A A G T C A C G T C G T A A C T G C G T A A C G T C A G T G T A C A G T C T C G A C G T A A C G T G A T C G T C A
Reverse Opposite:
A C G T C A T G C G T A A C G T A C G T C T A G A C T G G C T A C G T A C G A T T G A C A C G T C G T A C T A G A C G T G T A C
p-value:1e-12
log p-value:-2.805e+01
Information Content per bp:1.747
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif4.35%
Number of Background Sequences with motif0.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets24.2 +/- 13.1bp
Average Position of motif in Background85.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GATA(Zf),IR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:1
Score:0.60
Offset:3
Orientation:forward strand
Alignment:GACTAGATDCCVATHA--
---NAGATWNBNATCTNN
 A C T G C G T A A G T C A C G T C G T A A C T G C G T A A C G T C A G T G T A C A G T C T C G A C G T A A C G T G A T C G T C A A C G T A C G T
A C G T A C G T A C G T A T G C C G T A A C T G C G T A A C G T G C T A T C G A A G C T C G A T C G T A A C G T A G T C C G A T A C T G G A T C

PB0096.1_Zfp187_1/Jaspar

Match Rank:2
Score:0.57
Offset:2
Orientation:forward strand
Alignment:GACTAGATDCCVATHA
--TTATGTACTAATAA
 A C T G C G T A A G T C A C G T C G T A A C T G C G T A A C G T C A G T G T A C A G T C T C G A C G T A A C G T G A T C G T C A
A C G T A C G T A G C T G A C T T C G A G A C T C T A G C G A T C T G A A G T C A G C T G C T A C G T A C G A T C G T A G T C A

HMBOX1/MA0895.1/Jaspar

Match Rank:3
Score:0.56
Offset:1
Orientation:forward strand
Alignment:GACTAGATDCCVATHA
-ACTAGTTAAC-----
 A C T G C G T A A G T C A C G T C G T A A C T G C G T A A C G T C A G T G T A C A G T C T C G A C G T A A C G T G A T C G T C A
A C G T T G C A A G T C C G A T C T G A A T C G C G A T G C A T C G T A G T C A T A G C A C G T A C G T A C G T A C G T A C G T

PH0168.1_Hnf1b/Jaspar

Match Rank:4
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--GACTAGATDCCVATHA
ANNNCTAGTTAACNGNN-
 A C G T A C G T A C T G C G T A A G T C A C G T C G T A A C T G C G T A A C G T C A G T G T A C A G T C T C G A C G T A A C G T G A T C G T C A
C T G A T A G C C T A G T C A G A G T C G C A T T C G A C T A G C A G T C G A T C G T A C G T A A G T C T G C A C T A G T G A C G C A T A C G T

DUXA/MA0884.1/Jaspar

Match Rank:5
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--GACTAGATDCCVATHA
NTGATTAAATTAN-----
 A C G T A C G T A C T G C G T A A G T C A C G T C G T A A C T G C G T A A C G T C A G T G T A C A G T C T C G A C G T A A C G T G A T C G T C A
G A C T G C A T T C A G T G C A A G C T A C G T T C G A T C G A C T G A A G C T G A C T C T G A C T A G A C G T A C G T A C G T A C G T A C G T

PH0040.1_Hmbox1/Jaspar

Match Rank:6
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---GACTAGATDCCVATHA
GAAAACTAGTTAACATC--
 A C G T A C G T A C G T A C T G C G T A A G T C A C G T C G T A A C T G C G T A A C G T C A G T G T A C A G T C T C G A C G T A A C G T G A T C G T C A
T C A G G C T A C T G A C T G A C G T A A G T C A C G T C T G A C T A G A C G T G C A T C G T A C G T A A G T C C G T A C G A T A T G C A C G T A C G T

GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer

Match Rank:7
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--GACTAGATDCCVATHA
RGGATTAR----------
 A C G T A C G T A C T G C G T A A G T C A C G T C G T A A C T G C G T A A C G T C A G T G T A C A G T C T C G A C G T A A C G T G A T C G T C A
T C A G C T A G C T A G T G C A C G A T C G A T C G T A C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

DUX4/MA0468.1/Jaspar

Match Rank:8
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-GACTAGATDCCVATHA
TGATTAAATTA------
 A C G T A C T G C G T A A G T C A C G T C G T A A C T G C G T A A C G T C A G T G T A C A G T C T C G A C G T A A C G T G A T C G T C A
C G A T C T A G C G T A A C G T C A G T T C G A T C G A C T G A A C G T A G C T C G T A A C G T A C G T A C G T A C G T A C G T A C G T

DUX4(Homeobox)/Myoblasts-DUX4.V5-ChIP-Seq(GSE75791)/Homer

Match Rank:9
Score:0.51
Offset:-3
Orientation:reverse strand
Alignment:---GACTAGATDCCVATHA
NWTGATTRGRTTAWN----
 A C G T A C G T A C G T A C T G C G T A A G T C A C G T C G T A A C T G C G T A A C G T C A G T G T A C A G T C T C G A C G T A A C G T G A T C G T C A
C G T A G C A T C G A T C T A G C G T A A C G T A C G T C T G A T C A G C T A G A C G T A C G T G C T A C G T A G T A C A C G T A C G T A C G T A C G T

GSC2/MA0891.1/Jaspar

Match Rank:10
Score:0.51
Offset:-3
Orientation:reverse strand
Alignment:---GACTAGATDCCVATHA
GNGGATTAGN---------
 A C G T A C G T A C G T A C T G C G T A A G T C A C G T C G T A A C T G C G T A A C G T C A G T G T A C A G T C T C G A C G T A A C G T G A T C G T C A
C T A G T A G C T C A G C A T G T G C A C G A T C G A T C G T A C T A G A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T