Information for 5-GTGAGTGTGAGGG (Motif 9)

A C T G A C G T A C T G C G T A A C T G A C G T A T C G A C G T A C T G G T C A A C T G A C T G C A T G
Reverse Opposite:
G A T C G T A C G T A C A C G T A G T C C G T A A T G C C G T A A G T C A C G T A G T C C G T A A G T C
p-value:1e-9
log p-value:-2.228e+01
Information Content per bp:1.898
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.67%
Number of Background Sequences with motif4.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets54.2 +/- 22.6bp
Average Position of motif in Background45.1 +/- 26.5bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GTGAGTGTGAGGG
NTGATTGACAGN-
 A C T G A C G T A C T G C G T A A C T G A C G T A T C G A C G T A C T G G T C A A C T G A C T G C A T G
A C G T C G A T A T C G C G T A A C G T C A G T A C T G C T G A A G T C C T G A A T C G A T C G A C G T

MGA/MA0801.1/Jaspar

Match Rank:2
Score:0.59
Offset:2
Orientation:forward strand
Alignment:GTGAGTGTGAGGG
--AGGTGTGA---
 A C T G A C G T A C T G C G T A A C T G A C G T A T C G A C G T A C T G G T C A A C T G A C T G C A T G
A C G T A C G T C T G A T C A G A T C G A G C T C T A G G A C T A C T G C T G A A C G T A C G T A C G T

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:3
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:GTGAGTGTGAGGG
-TGAGTGACAGSC
 A C T G A C G T A C T G C G T A A C T G A C G T A T C G A C G T A C T G G T C A A C T G A C T G C A T G
A C G T C G A T A T C G T C G A A C T G C G A T A T C G C T G A A G T C C G T A A T C G T A C G G A T C

Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.59
Offset:1
Orientation:forward strand
Alignment:GTGAGTGTGAGGG
-TGCGTGGGYG--
 A C T G A C G T A C T G C G T A A C T G A C G T A T C G A C G T A C T G G T C A A C T G A C T G C A T G
A C G T C A G T T C A G G A T C A C T G A C G T C T A G A C T G A C T G G A C T C T A G A C G T A C G T

PB0130.1_Gm397_2/Jaspar

Match Rank:5
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--GTGAGTGTGAGGG-
NNGCGTGTGTGCNGCN
 A C G T A C G T A C T G A C G T A C T G C G T A A C T G A C G T A T C G A C G T A C T G G T C A A C T G A C T G C A T G A C G T
C A G T A C G T C T A G T G A C C A T G A C G T T A C G A G C T C A T G A G C T A C T G A G T C A G T C C A T G A G T C G A C T

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:6
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:GTGAGTGTGAGGG
BTGABTGACAGS-
 A C T G A C G T A C T G C G T A A C T G A C G T A T C G A C G T A C T G G T C A A C T G A C T G C A T G
A C G T C G A T A C T G C G T A A C G T A C G T A C T G C T G A A G T C C T G A T A C G A T G C A C G T

Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer

Match Rank:7
Score:0.58
Offset:1
Orientation:forward strand
Alignment:GTGAGTGTGAGGG
-NGCGTGGGCGGR
 A C T G A C G T A C T G C G T A A C T G A C G T A T C G A C G T A C T G G T C A A C T G A C T G C A T G
A C G T A C G T T A C G G A T C A C T G A C G T C T A G A C T G A C T G G A T C C T A G C A T G C T A G

TBX20/MA0689.1/Jaspar

Match Rank:8
Score:0.56
Offset:1
Orientation:forward strand
Alignment:GTGAGTGTGAGGG
-TAGGTGTGAAG-
 A C T G A C G T A C T G C G T A A C T G A C G T A T C G A C G T A C T G G T C A A C T G A C T G C A T G
A C G T C G A T C T G A T C A G A C T G A C G T A C T G C A G T C A T G C G T A C G T A T C A G A C G T

TBX1/MA0805.1/Jaspar

Match Rank:9
Score:0.56
Offset:2
Orientation:forward strand
Alignment:GTGAGTGTGAGGG
--AGGTGTGA---
 A C T G A C G T A C T G C G T A A C T G A C G T A T C G A C G T A C T G G T C A A C T G A C T G C A T G
A C G T A C G T C T G A T C A G A C T G A G C T A T C G G A C T A C T G T G C A A C G T A C G T A C G T

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:10
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---GTGAGTGTGAGGG
CAGGTAAGTAT-----
 A C G T A C G T A C G T A C T G A C G T A C T G C G T A A C T G A C G T A T C G A C G T A C T G G T C A A C T G A C T G C A T G
T G A C C G T A C T A G A C T G A C G T C T G A C G T A C T A G C G A T C T G A G A C T A C G T A C G T A C G T A C G T A C G T