Information for 2-CMRKCCYRGCGTGGKG (Motif 5)

A G T C T G A C C T A G C A T G A G T C A G T C A G T C C T A G A T C G A G T C A C T G A C G T A C T G A T C G A C T G A C T G
Reverse Opposite:
A G T C G T A C A T G C A G T C C G T A A G T C A C T G A T G C A G T C C T A G A C T G A C T G G T A C A G T C A C T G A C T G
p-value:1e-11
log p-value:-2.641e+01
Information Content per bp:1.847
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.67%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets32.7 +/- 20.2bp
Average Position of motif in Background59.5 +/- 14.5bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:1
Score:0.61
Offset:7
Orientation:forward strand
Alignment:CMRKCCYRGCGTGGKG
-------TGCGTG---
 A G T C T G A C C T A G C A T G A G T C A G T C A G T C C T A G A T C G A G T C A C T G A C G T A C T G A T C G A C T G A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T A C T G A G T C A C T G A C G T A C T G A C G T A C G T A C G T

ZIC3/MA0697.1/Jaspar

Match Rank:2
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:CMRKCCYRGCGTGGKG--
---NCGCAGCGGGGGGTC
 A G T C T G A C C T A G C A T G A G T C A G T C A G T C C T A G A T C G A G T C A C T G A C G T A C T G A T C G A C T G A C T G A C G T A C G T
A C G T A C G T A C G T C A T G G T A C C T A G G A T C T G C A T C A G A G T C C T A G A C T G A C T G C A T G C A T G C A T G A G C T T G A C

ZIC4/MA0751.1/Jaspar

Match Rank:3
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:CMRKCCYRGCGTGGKG--
---NCNCAGCGGGGGGTC
 A G T C T G A C C T A G C A T G A G T C A G T C A G T C C T A G A T C G A G T C A C T G A C G T A C T G A T C G A C T G A C T G A C G T A C G T
A C G T A C G T A C G T C A T G T G A C C T G A G A T C G T C A T C A G G A T C C T A G C A T G C A T G C A T G C A T G C A T G A G C T T G A C

ZIC1/MA0696.1/Jaspar

Match Rank:4
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:CMRKCCYRGCGTGGKG--
----CACAGCGGGGGGTC
 A G T C T G A C C T A G C A T G A G T C A G T C A G T C C T A G A T C G A G T C A C T G A C G T A C T G A T C G A C T G A C T G A C G T A C G T
A C G T A C G T A C G T A C G T T G A C C T G A A G T C T G C A T C A G A G T C C T A G C A T G T C A G C A T G C A T G C A T G A G C T T G A C

GLIS2/MA0736.1/Jaspar

Match Rank:5
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:CMRKCCYRGCGTGGKG--
----CTTCGCGGGGGGTC
 A G T C T G A C C T A G C A T G A G T C A G T C A G T C C T A G A T C G A G T C A C T G A C G T A C T G A T C G A C T G A C T G A C G T A C G T
A C G T A C G T A C G T A C G T T A G C C A G T G A C T G A T C T C A G G A T C C T A G C A T G A C T G C T A G C A T G C T A G A G C T T G A C

POL006.1_BREu/Jaspar

Match Rank:6
Score:0.56
Offset:7
Orientation:reverse strand
Alignment:CMRKCCYRGCGTGGKG
-------GGCGCGCT-
 A G T C T G A C C T A G C A T G A G T C A G T C A G T C C T A G A T C G A G T C A C T G A C G T A C T G A T C G A C T G A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G T A C G A G T C A C T G A G T C A T C G A T G C A C G T A C G T

ZNF354C/MA0130.1/Jaspar

Match Rank:7
Score:0.55
Offset:10
Orientation:reverse strand
Alignment:CMRKCCYRGCGTGGKG
----------GTGGAT
 A G T C T G A C C T A G C A T G A G T C A G T C A G T C C T A G A T C G A G T C A C T G A C G T A C T G A T C G A C T G A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G A C G T A C T G A C T G C G T A A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:8
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:CMRKCCYRGCGTGGKG--
---DCHCAGCAGGRGGCC
 A G T C T G A C C T A G C A T G A G T C A G T C A G T C C T A G A T C G A G T C A C T G A C G T A C T G A T C G A C T G A C T G A C G T A C G T
A C G T A C G T A C G T C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C

KLF5/MA0599.1/Jaspar

Match Rank:9
Score:0.54
Offset:7
Orientation:reverse strand
Alignment:CMRKCCYRGCGTGGKG-
-------GGGGNGGGGC
 A G T C T G A C C T A G C A T G A G T C A G T C A G T C C T A G A T C G A G T C A C T G A C G T A C T G A T C G A C T G A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G C T A G A C T G A C T G G A T C A C T G C A T G C T A G C T A G T G A C

Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer

Match Rank:10
Score:0.54
Offset:7
Orientation:forward strand
Alignment:CMRKCCYRGCGTGGKG---
-------NGCGTGGGCGGR
 A G T C T G A C C T A G C A T G A G T C A G T C A G T C C T A G A T C G A G T C A C T G A C G T A C T G A T C G A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G G A T C A C T G A C G T C T A G A C T G A C T G G A T C C T A G C A T G C T A G