Information for 5-AGAGTCTATG (Motif 16)

C G T A A C T G G T C A A C T G A G C T A G T C C G A T C G T A A C G T A T C G
Reverse Opposite:
A T G C C G T A A C G T C G T A A C T G C T G A A G T C A C G T A G T C A C G T
p-value:1e-8
log p-value:-2.064e+01
Information Content per bp:1.933
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.12%
Number of Background Sequences with motif33.1
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets66.0 +/- 24.7bp
Average Position of motif in Background47.6 +/- 25.8bp
Strand Bias (log2 ratio + to - strand density)1.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0203.1_Zfp691_2/Jaspar

Match Rank:1
Score:0.57
Offset:-6
Orientation:reverse strand
Alignment:------AGAGTCTATG-
NTNNNAGGAGTCTCNTN
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G G T C A A C T G A G C T A G T C C G A T C G T A A C G T A T C G A C G T
A T C G C A G T A C G T G C T A C T A G C T G A A C T G A C T G C G T A A T C G A G C T G T A C G C A T T G A C T A C G G A C T G T C A

PB0134.1_Hnf4a_2/Jaspar

Match Rank:2
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----AGAGTCTATG--
GGCAAAAGTCCAATAA
 A C G T A C G T A C G T A C G T C G T A A C T G G T C A A C T G A G C T A G T C C G A T C G T A A C G T A T C G A C G T A C G T
A C G T A C G T G A T C G T A C C G T A C T G A C T G A A C T G A C G T G T A C A G T C C T G A G T C A C G A T G T C A G C A T

Nr2e1/MA0676.1/Jaspar

Match Rank:3
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-AGAGTCTATG
AAAAGTCAA--
 A C G T C G T A A C T G G T C A A C T G A G C T A G T C C G A T C G T A A C G T A T C G
G C T A C T G A C T G A C T G A C T A G A G C T A G T C C G T A G C T A A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:4
Score:0.54
Offset:1
Orientation:forward strand
Alignment:AGAGTCTATG
-TWGTCTGV-
 C G T A A C T G G T C A A C T G A G C T A G T C C G A T C G T A A C G T A T C G
A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:5
Score:0.50
Offset:-3
Orientation:reverse strand
Alignment:---AGAGTCTATG
TTGAGTGSTT---
 A C G T A C G T A C G T C G T A A C T G G T C A A C T G A G C T A G T C C G A T C G T A A C G T A T C G
G C A T A C G T C T A G C G T A C A T G C G A T C T A G A T C G G A C T G A C T A C G T A C G T A C G T

Foxq1/MA0040.1/Jaspar

Match Rank:6
Score:0.50
Offset:-1
Orientation:forward strand
Alignment:-AGAGTCTATG
TATTGTTTATT
 A C G T C G T A A C T G G T C A A C T G A G C T A G T C C G A T C G T A A C G T A T C G
G A C T C T G A G C A T C G A T A C T G A C G T A C G T A C G T C T G A A C G T C G A T

BHLHE22/MA0818.1/Jaspar

Match Rank:7
Score:0.50
Offset:2
Orientation:reverse strand
Alignment:AGAGTCTATG--
--ANCATATGGT
 C G T A A C T G G T C A A C T G A G C T A G T C C G A T C G T A A C G T A T C G A C G T A C G T
A C G T A C G T C T G A T C G A T G A C C T G A A C G T C T G A G A C T A C T G A C T G A G C T

PB0125.1_Gata3_2/Jaspar

Match Rank:8
Score:0.50
Offset:-6
Orientation:forward strand
Alignment:------AGAGTCTATG------
TTTTGTAGATTTTATCGACTTA
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G G T C A A C T G A G C T A G T C C G A T C G T A A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T
G A C T A C G T G C A T C A G T T C A G A G C T G C T A C T A G G C T A G A C T C G A T A C G T G A C T C T G A A C G T G A T C C T A G T C G A A T G C C G A T G C A T G T C A

Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer

Match Rank:9
Score:0.49
Offset:-1
Orientation:forward strand
Alignment:-AGAGTCTATG
HNRAATCAAT-
 A C G T C G T A A C T G G T C A A C T G A G C T A G T C C G A T C G T A A C G T A T C G
G C T A A C T G T C G A C T G A C T G A A C G T T A G C C T G A C G T A C G A T A C G T

NFY(CCAAT)/Promoter/Homer

Match Rank:10
Score:0.48
Offset:2
Orientation:forward strand
Alignment:AGAGTCTATG--
--AGCCAATCGG
 C G T A A C T G G T C A A C T G A G C T A G T C C G A T C G T A A C G T A T C G A C G T A C G T
A C G T A C G T T C G A C T A G A G T C A G T C C G T A C G T A A C G T T A G C T C A G T A C G