Information for 6-TGGCTAACAAADGBAA (Motif 8)

A C G T A C T G A C T G A G T C A G C T C G T A C T G A G T A C G T C A G T C A C G T A C G T A A C T G A C T G C G T A G T C A
Reverse Opposite:
A C G T C G A T T A G C A G T C G A C T A C G T C A G T A C G T A C T G A G C T A C G T C T G A C T A G A G T C G T A C C G T A
p-value:1e-8
log p-value:-2.043e+01
Information Content per bp:1.742
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif12.50%
Number of Background Sequences with motif4.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets52.0 +/- 27.3bp
Average Position of motif in Background25.7 +/- 12.9bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0167.1_Tcf1/Jaspar

Match Rank:1
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---TGGCTAACAAADGBAA
CCTTAGTTAACTAAAAT--
 A C G T A C G T A C G T A C G T A C T G A C T G A G T C A G C T C G T A C T G A G T A C G T C A G T C A C G T A C G T A A C T G A C T G C G T A G T C A
G A T C A T G C A C G T A G C T T C A G A T C G G A C T G C A T C G T A C G T A A T G C G A C T C T G A T G C A C G T A C T G A A C G T A C G T A C G T

PB0109.1_Bbx_2/Jaspar

Match Rank:2
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---TGGCTAACAAADGBAA
TGATTGTTAACAGTTGG--
 A C G T A C G T A C G T A C G T A C T G A C T G A G T C A G C T C G T A C T G A G T A C G T C A G T C A C G T A C G T A A C T G A C T G C G T A G T C A
G A C T T C A G G C T A G A C T A C G T C A T G C A G T A G C T T C G A G T C A G T A C T C G A A T C G G C A T A C G T C T A G T C A G A C G T A C G T

PB0081.1_Tcf1_1/Jaspar

Match Rank:3
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----TGGCTAACAAADGBAA
NNNTTAGTTAACTNANN---
 A C G T A C G T A C G T A C G T A C G T A C T G A C T G A G T C A G C T C G T A C T G A G T A C G T C A G T C A C G T A C G T A A C T G A C T G C G T A G T C A
G A C T C A G T G A C T A G C T G A C T C T G A T A C G G A C T C G A T C G T A C G T A A G T C A G C T C T G A T C G A C T A G A C G T A C G T A C G T A C G T

PH0168.1_Hnf1b/Jaspar

Match Rank:4
Score:0.54
Offset:-5
Orientation:reverse strand
Alignment:-----TGGCTAACAAADGBAA
ANNNCTAGTTAACNGNN----
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G A G T C A G C T C G T A C T G A G T A C G T C A G T C A C G T A C G T A A C T G A C T G C G T A G T C A
C T G A T A G C C T A G T C A G A G T C G C A T T C G A C T A G C A G T C G A T C G T A C G T A A G T C T G C A C T A G T G A C G C A T A C G T A C G T A C G T A C G T

Sox2/MA0143.3/Jaspar

Match Rank:5
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:TGGCTAACAAADGBAA
-----AACAAAGG---
 A C G T A C T G A C T G A G T C A G C T C G T A C T G A G T A C G T C A G T C A C G T A C G T A A C T G A C T G C G T A G T C A
A C G T A C G T A C G T A C G T A C G T T C G A C G T A A G T C C G T A C G T A C G T A A C T G A C T G A C G T A C G T A C G T

HLTF/MA0109.1/Jaspar

Match Rank:6
Score:0.52
Offset:6
Orientation:reverse strand
Alignment:TGGCTAACAAADGBAA
------NNATAAGGNN
 A C G T A C T G A C T G A G T C A G C T C G T A C T G A G T A C G T C A G T C A C G T A C G T A A C T G A C T G C G T A G T C A
A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T G T C A G C A T C G T A C G T A A C T G A C T G C G A T G C A T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:7
Score:0.52
Offset:5
Orientation:reverse strand
Alignment:TGGCTAACAAADGBAA
-----RACAAWGG---
 A C G T A C T G A C T G A G T C A G C T C G T A C T G A G T A C G T C A G T C A C G T A C G T A A C T G A C T G C G T A G T C A
A C G T A C G T A C G T A C G T A C G T T C G A G T C A T G A C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T

PB0071.1_Sox4_1/Jaspar

Match Rank:8
Score:0.51
Offset:0
Orientation:forward strand
Alignment:TGGCTAACAAADGBAA-
AGAAGAACAAAGGACTA
 A C G T A C T G A C T G A G T C A G C T C G T A C T G A G T A C G T C A G T C A C G T A C G T A A C T G A C T G C G T A G T C A A C G T
G T C A A C T G C T G A C G T A C T A G T C G A C G T A A G T C C G T A C G T A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

CEBP:CEBP(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer

Match Rank:9
Score:0.51
Offset:-3
Orientation:forward strand
Alignment:---TGGCTAACAAADGBAA-
NTNATGCAAYMNNHTGMAAY
 A C G T A C G T A C G T A C G T A C T G A C T G A G T C A G C T C G T A C T G A G T A C G T C A G T C A C G T A C G T A A C T G A C T G C G T A G T C A A C G T
T G C A G C A T C G A T C G T A C A G T A C T G G T A C C G T A C T G A A G C T G T C A A C T G C T A G G T C A C G A T A C T G G T A C T G C A C G T A A G C T

HMBOX1/MA0895.1/Jaspar

Match Rank:10
Score:0.51
Offset:-2
Orientation:forward strand
Alignment:--TGGCTAACAAADGBAA
ACTAGTTAAC--------
 A C G T A C G T A C G T A C T G A C T G A G T C A G C T C G T A C T G A G T A C G T C A G T C A C G T A C G T A A C T G A C T G C G T A G T C A
T G C A A G T C C G A T C T G A A T C G C G A T G C A T C G T A G T C A T A G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T