Information for 2-VTATCGTATAAGA (Motif 7)

T A C G A C G T C G T A C G A T A G T C A C T G A C G T C T G A C G A T C T G A C G T A A C T G C G T A
Reverse Opposite:
A C G T A G T C A C G T A G C T C G T A A G C T G T C A A G T C A C T G C G T A C G A T C G T A A C G T
p-value:1e-9
log p-value:-2.129e+01
Information Content per bp:1.802
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif12.50%
Number of Background Sequences with motif4.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets51.7 +/- 11.0bp
Average Position of motif in Background46.3 +/- 34.2bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0106.1_Arid5a_2/Jaspar

Match Rank:1
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--VTATCGTATAAGA--
TNNTTTCGTATTNNANN
 A C G T A C G T T A C G A C G T C G T A C G A T A G T C A C T G A C G T C T G A C G A T C T G A C G T A A C T G C G T A A C G T A C G T
A C G T A G C T T C G A G C A T G A C T G A C T A T G C A T C G A C G T T G C A A C G T C G A T A C T G G C A T C T G A G A C T T A C G

PB0022.1_Gata5_1/Jaspar

Match Rank:2
Score:0.54
Offset:0
Orientation:forward strand
Alignment:VTATCGTATAAGA----
TAAACTGATAAGAAGAT
 T A C G A C G T C G T A C G A T A G T C A C T G A C G T C T G A C G A T C T G A C G T A A C T G C G T A A C G T A C G T A C G T A C G T
G C A T C G T A C G T A C T G A A G T C G C A T A C T G C G T A C G A T G C T A C G T A T A C G T C G A T C G A C A T G C G T A C A G T

HOXD11/MA0908.1/Jaspar

Match Rank:3
Score:0.53
Offset:2
Orientation:forward strand
Alignment:VTATCGTATAAGA
--GTCGTAAAAA-
 T A C G A C G T C G T A C G A T A G T C A C T G A C G T C T G A C G A T C T G A C G T A A C T G C G T A
A C G T A C G T T C A G A C G T G A T C C T A G C G A T C G T A C G T A G C T A G C T A G C T A A C G T

HOXC11/MA0651.1/Jaspar

Match Rank:4
Score:0.53
Offset:1
Orientation:forward strand
Alignment:VTATCGTATAAGA
-GGTCGTAAAAT-
 T A C G A C G T C G T A C G A T A G T C A C T G A C G T C T G A C G A T C T G A C G T A A C T G C G T A
A C G T C T A G T C A G G A C T G A T C C T A G C G A T C G T A C G T A G T C A G C T A G C A T A C G T

PB0075.1_Sp100_1/Jaspar

Match Rank:5
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--VTATCGTATAAGA
ATTTTCCGNNAAAT-
 A C G T A C G T T A C G A C G T C G T A C G A T A G T C A C T G A C G T C T G A C G A T C T G A C G T A A C T G C G T A
G T C A C G A T C G A T G C A T C A G T G T A C A T G C A T C G C A G T C T G A C G T A G C T A G C T A A G C T A C G T

GMEB2/MA0862.1/Jaspar

Match Rank:6
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:VTATCGTATAAGA
-TTACGTAA----
 T A C G A C G T C G T A C G A T A G T C A C T G A C G T C T G A C G A T C T G A C G T A A C T G C G T A
A C G T A C G T A C G T C T G A A T G C A C T G A G C T G T C A T G C A A C G T A C G T A C G T A C G T

HOXC12/MA0906.1/Jaspar

Match Rank:7
Score:0.52
Offset:1
Orientation:forward strand
Alignment:VTATCGTATAAGA
-GGTCGTAAAAA-
 T A C G A C G T C G T A C G A T A G T C A C T G A C G T C T G A C G A T C T G A C G T A A C T G C G T A
A C G T C T A G T C A G G A C T G T A C T C A G A G C T G C T A C G T A G C T A G T C A G C T A A C G T

Crem/MA0609.1/Jaspar

Match Rank:8
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-VTATCGTATAAGA
TATGACGTAA----
 A C G T T A C G A C G T C G T A C G A T A G T C A C T G A C G T C T G A C G A T C T G A C G T A A C T G C G T A
A C G T C T G A A C G T A C T G C G T A A G T C A C T G A C G T G T C A C G T A A C G T A C G T A C G T A C G T

Atf1/MA0604.1/Jaspar

Match Rank:9
Score:0.51
Offset:0
Orientation:forward strand
Alignment:VTATCGTATAAGA
ATGACGTA-----
 T A C G A C G T C G T A C G A T A G T C A C T G A C G T C T G A C G A T C T G A C G T A A C T G C G T A
T C G A G C A T A C T G C G T A A G T C C T A G G A C T T C G A A C G T A C G T A C G T A C G T A C G T

Hoxa11/MA0911.1/Jaspar

Match Rank:10
Score:0.51
Offset:1
Orientation:forward strand
Alignment:VTATCGTATAAGA
-GGTCGTAAAATT
 T A C G A C G T C G T A C G A T A G T C A C T G A C G T C T G A C G A T C T G A C G T A A C T G C G T A
A C G T C T A G T C A G A G C T G A T C C T A G C G A T C G T A C G T A G C T A G C T A G C A T C G A T