Information for 10-ACTGCTATGA (Motif 35)

C G T A A G T C A C G T A C T G A G T C A C G T C G T A A C G T A C T G C G T A
Reverse Opposite:
A C G T A G T C C G T A A C G T C G T A A C T G A G T C C G T A A C T G A C G T
p-value:1e-3
log p-value:-7.554e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif4.17%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets27.0 +/- 0.0bp
Average Position of motif in Background34.7 +/- 14.8bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:1
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---ACTGCTATGA
CCCCCTGCTGTG-
 A C G T A C G T A C G T C G T A A G T C A C G T A C T G A G T C A C G T C G T A A C G T A C T G C G T A
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T

PB0022.1_Gata5_1/Jaspar

Match Rank:2
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---ACTGCTATGA----
TAAACTGATAAGAAGAT
 A C G T A C G T A C G T C G T A A G T C A C G T A C T G A G T C A C G T C G T A A C G T A C T G C G T A A C G T A C G T A C G T A C G T
G C A T C G T A C G T A C T G A A G T C G C A T A C T G C G T A C G A T G C T A C G T A T A C G T C G A T C G A C A T G C G T A C A G T

PB0205.1_Zic1_2/Jaspar

Match Rank:3
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---ACTGCTATGA--
TNTCCTGCTGTGNNG
 A C G T A C G T A C G T C G T A A G T C A C G T A C T G A G T C A C G T C G T A A C G T A C T G C G T A A C G T A C G T
G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G

MAFG::NFE2L1/MA0089.1/Jaspar

Match Rank:4
Score:0.57
Offset:5
Orientation:forward strand
Alignment:ACTGCTATGA-
-----CATGAC
 C G T A A G T C A C G T A C T G A G T C A C G T C G T A A C G T A C T G C G T A A C G T
A C G T A C G T A C G T A C G T A C G T T A G C T C G A A C G T C A T G C G T A A G T C

PB0207.1_Zic3_2/Jaspar

Match Rank:5
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---ACTGCTATGA--
NNTCCTGCTGTGNNN
 A C G T A C G T A C G T C G T A A G T C A C G T A C T G A G T C A C G T C G T A A C G T A C T G C G T A A C G T A C G T
G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C

PB0055.1_Rfx4_1/Jaspar

Match Rank:6
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---ACTGCTATGA--
NNCGTTGCTATGGNN
 A C G T A C G T A C G T C G T A A G T C A C G T A C T G A G T C A C G T C G T A A C G T A C T G C G T A A C G T A C G T
G C T A A G T C A T G C C T A G A G C T G A C T C T A G A G T C A G C T C T G A C A G T T A C G A T C G C A G T T C G A

PB0149.1_Myb_2/Jaspar

Match Rank:7
Score:0.55
Offset:-6
Orientation:forward strand
Alignment:------ACTGCTATGA
CGACCAACTGCCATGC
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A G T C A C G T A C T G A G T C A C G T C G T A A C G T A C T G C G T A
A G T C C A T G G T C A A G T C G A T C C G T A G T C A A G T C A G C T T C A G G A T C G A T C C T G A A G C T A T C G A G T C

PB0195.1_Zbtb3_2/Jaspar

Match Rank:8
Score:0.55
Offset:-5
Orientation:forward strand
Alignment:-----ACTGCTATGA-
CAATCACTGGCAGAAT
 A C G T A C G T A C G T A C G T A C G T C G T A A G T C A C G T A C T G A G T C A C G T C G T A A C G T A C T G C G T A A C G T
A G T C G C T A T C G A G C A T G T A C C T G A T G A C C G A T A C T G A C T G A G T C C T G A C T A G G C T A C G T A C G A T

AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer

Match Rank:9
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---ACTGCTATGA
CCAACTGCCA---
 A C G T A C G T A C G T C G T A A G T C A C G T A C T G A G T C A C G T C G T A A C G T A C T G C G T A
A G T C G A T C C G T A C G T A A G T C A C G T A C T G G A T C G A T C C T G A A C G T A C G T A C G T

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:10
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:ACTGCTATGA---
---CCTTTGATGT
 C G T A A G T C A C G T A C T G A G T C A C G T C G T A A C G T A C T G C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A T G C A G T C A C G T A C G T A C G T A T C G C G T A C G A T T A C G G A C T