Information for 5-ATCACGKRGA (Motif 28)

C G T A A G C T A G T C G C T A A T G C A T C G C A G T T C A G C T A G G C T A
Reverse Opposite:
C A G T A G T C A G C T G T C A A T G C A T C G C A G T C T A G C T G A C G A T
p-value:1e-4
log p-value:-1.143e+01
Information Content per bp:1.628
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif25.00%
Number of Background Sequences with motif1008.8
Percentage of Background Sequences with motif2.20%
Average Position of motif in Targets57.0 +/- 24.0bp
Average Position of motif in Background48.9 +/- 31.3bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Mitf/MA0620.1/Jaspar

Match Rank:1
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-ATCACGKRGA
GGTCACGTGG-
 A C G T C G T A A G C T A G T C G C T A A T G C A T C G C A G T T C A G C T A G G C T A
C T A G T C A G A C G T T G A C G T C A A G T C T C A G G C A T A C T G T C A G A C G T

NPAS2(bHLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer

Match Rank:2
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:ATCACGKRGA
GTCACGTGGM
 C G T A A G C T A G T C G C T A A T G C A T C G C A G T T C A G C T A G G C T A
T C A G C A G T A G T C C G T A A T G C T C A G G C A T A C T G A C T G T G A C

MLX/MA0663.1/Jaspar

Match Rank:3
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:ATCACGKRGA
ATCACGTGAT
 C G T A A G C T A G T C G C T A A T G C A T C G C A G T T C A G C T A G G C T A
C T G A G A C T G T A C C G T A G A T C A C T G A G C T C T A G T G C A G A C T

Mycn/MA0104.3/Jaspar

Match Rank:4
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:ATCACGKRGA
--CACGTGGC
 C G T A A G C T A G T C G C T A A T G C A T C G C A G T T C A G C T A G G C T A
A C G T A C G T A G T C C G T A A G T C A C T G A C G T A C T G A T C G G A T C

MAX::MYC/MA0059.1/Jaspar

Match Rank:5
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-ATCACGKRGA
GACCACGTGGT
 A C G T C G T A A G C T A G T C G C T A A T G C A T C G C A G T T C A G C T A G G C T A
C T A G C T G A T A C G G T A C C G T A A G T C C T A G A G C T A C T G A C T G G A C T

MLXIPL/MA0664.1/Jaspar

Match Rank:6
Score:0.64
Offset:0
Orientation:forward strand
Alignment:ATCACGKRGA
ATCACGTGAT
 C G T A A G C T A G T C G C T A A T G C A T C G C A G T T C A G C T A G G C T A
C T G A C A G T A T G C C G T A T A G C T C A G A C G T A C T G G C T A G A C T

c-Myc(bHLH)/LNCAP-cMyc-ChIP-Seq(Unpublished)/Homer

Match Rank:7
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:ATCACGKRGA
--CACGTGGN
 C G T A A G C T A G T C G C T A A T G C A T C G C A G T T C A G C T A G G C T A
A C G T A C G T G T A C C T G A A G T C C T A G G A C T A C T G A T C G A G C T

Creb3l2/MA0608.1/Jaspar

Match Rank:8
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:ATCACGKRGA
-ACACGTGGC
 C G T A A G C T A G T C G C T A A T G C A T C G C A G T T C A G C T A G G C T A
A C G T G C T A A T G C C G T A A G T C A C T G A C G T A T C G C A T G G T A C

Arntl/MA0603.1/Jaspar

Match Rank:9
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-ATCACGKRGA
GGTCACGTGC-
 A C G T C G T A A G C T A G T C G C T A A T G C A T C G C A G T T C A G C T A G G C T A
C A T G T C A G C A G T G T A C G C T A A G T C C T A G G A C T C A T G G A T C A C G T

Usf2(bHLH)/C2C12-Usf2-ChIP-Seq(GSE36030)/Homer

Match Rank:10
Score:0.62
Offset:0
Orientation:forward strand
Alignment:ATCACGKRGA
GTCACGTGGT
 C G T A A G C T A G T C G C T A A T G C A T C G C A G T T C A G C T A G G C T A
T C A G A C G T A G T C T C G A A G T C T C A G G C A T C T A G C T A G A G C T