Information for 3-CGGTTRKGAT (Motif 27)

A T G C A C T G A C T G A C G T A C G T C T A G A C G T A C T G C G T A A C G T
Reverse Opposite:
C G T A A C G T G T A C G T C A A G T C C G T A C G T A A G T C A G T C A T C G
p-value:1e-5
log p-value:-1.263e+01
Information Content per bp:1.898
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif8.33%
Number of Background Sequences with motif5.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets64.5 +/- 10.5bp
Average Position of motif in Background51.5 +/- 32.7bp
Strand Bias (log2 ratio + to - strand density)-10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer

Match Rank:1
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---CGGTTRKGAT
BRRCVGTTDN---
 A C G T A C G T A C G T A T G C A C T G A C T G A C G T A C G T C T A G A C G T A C T G C G T A A C G T
A G C T C T A G C T A G A G T C T G C A A C T G A C G T C G A T C G T A T C A G A C G T A C G T A C G T

MF0009.1_TRP(MYB)_class/Jaspar

Match Rank:2
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---CGGTTRKGAT
TGTCGGTT-----
 A C G T A C G T A C G T A T G C A C T G A C T G A C G T A C G T C T A G A C G T A C T G C G T A A C G T
C G A T C A T G C G A T G A T C T C A G A T C G G C A T G C A T A C G T A C G T A C G T A C G T A C G T

MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer

Match Rank:3
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--CGGTTRKGAT
GGCVGTTR----
 A C G T A C G T A T G C A C T G A C T G A C G T A C G T C T A G A C G T A C T G C G T A A C G T
C T A G C T A G A G T C T C A G A C T G A C G T A C G T C T G A A C G T A C G T A C G T A C G T

PB0029.1_Hic1_1/Jaspar

Match Rank:4
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---CGGTTRKGAT---
NGTAGGTTGGCATNNN
 A C G T A C G T A C G T A T G C A C T G A C T G A C G T A C G T C T A G A C G T A C T G C G T A A C G T A C G T A C G T A C G T
C T A G C T A G A G C T C G T A T C A G T C A G A C G T C A G T A C T G A T C G A G T C C G T A G A C T T G C A T C A G G C A T

PB0045.1_Myb_1/Jaspar

Match Rank:5
Score:0.62
Offset:-7
Orientation:reverse strand
Alignment:-------CGGTTRKGAT
NNNNTAACGGTTNNNAN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A C T G A C T G A C G T A C G T C T A G A C G T A C T G C G T A A C G T
G C T A C T G A C G T A C G T A G A C T C T G A C G T A A G T C A T C G C A T G G A C T G A C T C A G T G T A C G T A C G C T A C G A T

PB0046.1_Mybl1_1/Jaspar

Match Rank:6
Score:0.60
Offset:-7
Orientation:reverse strand
Alignment:-------CGGTTRKGAT
NNANTAACGGTTNNNAN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A C T G A C T G A C G T A C G T C T A G A C G T A C T G C G T A A C G T
G C T A C T G A C G T A C G A T G A C T C T G A T C G A A G T C A T C G C A T G G A C T G A C T C G A T G A C T G A T C G C T A C T G A

AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer

Match Rank:7
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---CGGTTRKGAT
TGGCAGTTGG---
 A C G T A C G T A C G T A T G C A C T G A C T G A C G T A C G T C T A G A C G T A C T G C G T A A C G T
G A C T C T A G C T A G A G T C T G C A A C T G A C G T A C G T C T A G T C A G A C G T A C G T A C G T

RUNX2/MA0511.2/Jaspar

Match Rank:8
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---CGGTTRKGAT
TTGCGGTTT----
 A C G T A C G T A C G T A T G C A C T G A C T G A C G T A C G T C T A G A C G T A C T G C G T A A C G T
A G C T A C G T A C T G G A T C A C T G A C T G A C G T G A C T C G A T A C G T A C G T A C G T A C G T

PB0120.1_Foxj1_2/Jaspar

Match Rank:9
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---CGGTTRKGAT--
GTNTTGTTGTGANNT
 A C G T A C G T A C G T A T G C A C T G A C T G A C G T A C G T C T A G A C G T A C T G C G T A A C G T A C G T A C G T
C A T G A G C T T A C G G A C T G C A T A C T G A C G T G A C T C T A G A G C T A C T G T G C A A G T C T C G A C G A T

PB0034.1_Irf4_1/Jaspar

Match Rank:10
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--CGGTTRKGAT---
TNTGGTTTCGATACN
 A C G T A C G T A T G C A C T G A C T G A C G T A C G T C T A G A C G T A C T G C G T A A C G T A C G T A C G T A C G T
G C A T A C G T G A C T C T A G A T C G C G A T C G A T A C G T A G T C C T A G C T G A G C A T G C T A G A T C A C T G