Information for 1-AGAAGTTAACTTAKMA (Motif 1)

C G T A C T A G T G C A T C G A A C T G A C G T C G A T G T C A C T G A T G A C C G A T A C G T C G T A A C T G T G A C C G T A
Reverse Opposite:
C G A T A C T G T G A C G C A T T G C A C G T A A C T G A G C T A C G T C G T A C G T A G T A C A G C T A C G T G A T C G C A T
p-value:1e-15
log p-value:-3.636e+01
Information Content per bp:1.613
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif12.98%
Number of Background Sequences with motif352.8
Percentage of Background Sequences with motif0.72%
Average Position of motif in Targets49.7 +/- 24.3bp
Average Position of motif in Background50.8 +/- 26.2bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0081.1_Tcf1_1/Jaspar

Match Rank:1
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-AGAAGTTAACTTAKMA
ACTTAGTTAACTAAAAA
 A C G T C G T A C T A G T G C A T C G A A C T G A C G T C G A T G T C A C T G A T G A C C G A T A C G T C G T A A C T G T G A C C G T A
T G C A G A T C A G C T G A C T T C G A C T A G G A C T C G A T G C T A C G T A A G T C G A C T C T G A T C G A C T G A G T C A C T G A

PH0167.1_Tcf1/Jaspar

Match Rank:2
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--AGAAGTTAACTTAKMA
NTTTTAGTTAACNNAGN-
 A C G T A C G T C G T A C T A G T G C A T C G A A C T G A C G T C G A T G T C A C T G A T G A C C G A T A C G T C G T A A C T G T G A C C G T A
T G C A G A C T G C A T A C G T G A C T C T G A A T C G G C A T C G A T C G T A C T G A T A G C A G C T T C G A T G C A T A C G C T A G A C G T

Nr2e1/MA0676.1/Jaspar

Match Rank:3
Score:0.53
Offset:0
Orientation:forward strand
Alignment:AGAAGTTAACTTAKMA
AAAAGTCAA-------
 C G T A C T A G T G C A T C G A A C T G A C G T C G A T G T C A C T G A T G A C C G A T A C G T C G T A A C T G T G A C C G T A
G C T A C T G A C T G A C T G A C T A G A G C T A G T C C G T A G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

FOXP1/MA0481.1/Jaspar

Match Rank:4
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-AGAAGTTAACTTAKMA
CAAAAGTAAACAAAG--
 A C G T C G T A C T A G T G C A T C G A A C T G A C G T C G A T G T C A C T G A T G A C C G A T A C G T C G T A A C T G T G A C C G T A
G T A C G C T A C G T A T C G A C T G A T C A G G C A T C G T A C G T A C G T A T G A C C G T A T G C A C G T A T C A G A C G T A C G T

MEF2C/MA0497.1/Jaspar

Match Rank:5
Score:0.51
Offset:1
Orientation:forward strand
Alignment:AGAAGTTAACTTAKMA
-ATGCTAAAAATAGAA
 C G T A C T A G T G C A T C G A A C T G A C G T C G A T G T C A C T G A T G A C C G A T A C G T C G T A A C T G T G A C C G T A
A C G T C T G A C G A T C A T G G T A C A G C T G C T A C T G A C T G A C G T A C G T A G A C T C T G A T C A G G T C A G C T A

PB0015.1_Foxa2_1/Jaspar

Match Rank:6
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-AGAAGTTAACTTAKMA
AAAAAGTAAACAAAGAC
 A C G T C G T A C T A G T G C A T C G A A C T G A C G T C G A T G T C A C T G A T G A C C G A T A C G T C G T A A C T G T G A C C G T A
G C T A C G T A G C T A C G T A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A G C T A C G T A T A C G C T G A A G T C

Hnf1(Homeobox)/Liver-Foxa2-Chip-Seq(GSE25694)/Homer

Match Rank:7
Score:0.50
Offset:3
Orientation:forward strand
Alignment:AGAAGTTAACTTAKMA
---GGTTAAACATTAA
 C G T A C T A G T G C A T C G A A C T G A C G T C G A T G T C A C T G A T G A C C G A T A C G T C G T A A C T G T G A C C G T A
A C G T A C G T A C G T C T A G C T A G G C A T C G A T C T G A G T C A G C T A A T G C C G T A C A G T G A C T C G T A T G C A

Foxj3/MA0851.1/Jaspar

Match Rank:8
Score:0.50
Offset:-1
Orientation:forward strand
Alignment:-AGAAGTTAACTTAKMA
AAAAAGTAAACAAACAC
 A C G T C G T A C T A G T G C A T C G A A C T G A C G T C G A T G T C A C T G A T G A C C G A T A C G T C G T A A C T G T G A C C G T A
G C T A C T G A G T C A C G T A C T G A T C A G G A C T G T C A G C T A C G T A A G T C C G T A G C T A G C T A T A G C T G A C G T A C

PB0017.1_Foxj3_1/Jaspar

Match Rank:9
Score:0.50
Offset:-1
Orientation:forward strand
Alignment:-AGAAGTTAACTTAKMA
AAAAAGTAAACAAACAC
 A C G T C G T A C T A G T G C A T C G A A C T G A C G T C G A T G T C A C T G A T G A C C G A T A C G T C G T A A C T G T G A C C G T A
G C T A C T G A G T C A C G T A C T G A T C A G G A C T G T C A G C T A C G T A A G T C C G T A G C T A G C T A T A G C T G A C G T A C

PB0109.1_Bbx_2/Jaspar

Match Rank:10
Score:0.50
Offset:-1
Orientation:forward strand
Alignment:-AGAAGTTAACTTAKMA
TGATTGTTAACAGTTGG
 A C G T C G T A C T A G T G C A T C G A A C T G A C G T C G A T G T C A C T G A T G A C C G A T A C G T C G T A A C T G T G A C C G T A
G A C T T C A G G C T A G A C T A C G T C A T G C A G T A G C T T C G A G T C A G T A C T C G A A T C G G C A T A C G T C T A G T C A G