Information for 9-CAAAGTCCAA (Motif 14)

G T A C G T C A G T C A G T C A T A C G C G A T A T G C G A T C G C T A T G C A
Reverse Opposite:
A C G T C G A T C T A G T A C G G C T A A T G C C A G T C A G T A C G T A C T G
p-value:1e-9
log p-value:-2.096e+01
Information Content per bp:1.682
Number of Target Sequences with motif41.0
Percentage of Target Sequences with motif4.65%
Number of Background Sequences with motif739.5
Percentage of Background Sequences with motif1.53%
Average Position of motif in Targets51.6 +/- 25.9bp
Average Position of motif in Background50.3 +/- 26.6bp
Strand Bias (log2 ratio + to - strand density)-0.8
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0134.1_Hnf4a_2/Jaspar

Match Rank:1
Score:0.87
Offset:-3
Orientation:forward strand
Alignment:---CAAAGTCCAA---
GGCAAAAGTCCAATAA
 A C G T A C G T A C G T G T A C G T C A G T C A G T C A T A C G C G A T A T G C G A T C G C T A T G C A A C G T A C G T A C G T
A C G T A C G T G A T C G T A C C G T A C T G A C T G A A C T G A C G T G T A C A G T C C T G A G T C A C G A T G T C A G C A T

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:2
Score:0.83
Offset:-7
Orientation:forward strand
Alignment:-------CAAAGTCCAA
CANAGNNCAAAGTCCA-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T A C G T C A G T C A G T C A T A C G C G A T A T G C G A T C G C T A T G C A
G T A C G C T A T C A G C T G A C T A G C A T G A G C T G A T C T G C A T C G A C T G A A C T G C A G T A G T C G A T C G C T A A C G T

HNF4G/MA0484.1/Jaspar

Match Rank:3
Score:0.82
Offset:-6
Orientation:forward strand
Alignment:------CAAAGTCCAA
AGAGTCCAAAGTCCA-
 A C G T A C G T A C G T A C G T A C G T A C G T G T A C G T C A G T C A G T C A T A C G C G A T A T G C G A T C G C T A T G C A
C G T A T C A G C T G A C T A G C A G T A G T C A G T C T G C A T C G A C T G A C A T G C A G T A G T C G A T C G C T A A C G T

Hnf4a/MA0114.3/Jaspar

Match Rank:4
Score:0.82
Offset:-5
Orientation:forward strand
Alignment:-----CAAAGTCCAA-
GGGGTCAAAGTCCAAT
 A C G T A C G T A C G T A C G T A C G T G T A C G T C A G T C A G T C A T A C G C G A T A T G C G A T C G C T A T G C A A C G T
T C A G T C A G C T A G C A T G C A G T A G T C T C G A C T G A C T G A A C T G A C G T A G T C A G T C C T G A T C G A G A C T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.67
Offset:0
Orientation:forward strand
Alignment:CAAAGTCCAA
CAAAGGTCAG
 G T A C G T C A G T C A G T C A T A C G C G A T A T G C G A T C G C T A T G C A
A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G

Nr2e1/MA0676.1/Jaspar

Match Rank:6
Score:0.61
Offset:0
Orientation:forward strand
Alignment:CAAAGTCCAA
AAAAGTCAA-
 G T A C G T C A G T C A G T C A T A C G C G A T A T G C G A T C G C T A T G C A
G C T A C T G A C T G A C T G A C T A G A G C T A G T C C G T A G C T A A C G T

SOX10/MA0442.1/Jaspar

Match Rank:7
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-CAAAGTCCAA
ACAAAG-----
 A C G T G T A C G T C A G T C A G T C A T A C G C G A T A T G C G A T C G C T A T G C A
G T C A A T G C C G T A T G C A C G T A C T A G A C G T A C G T A C G T A C G T A C G T

ESRRB/MA0141.3/Jaspar

Match Rank:8
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-CAAAGTCCAA
TCAAGGTCATA
 A C G T G T A C G T C A G T C A G T C A T A C G C G A T A T G C G A T C G C T A T G C A
G A C T T A G C G C T A T C G A T C A G A T C G A G C T G A T C C T G A G C A T G C T A

NR1H2::RXRA/MA0115.1/Jaspar

Match Rank:9
Score:0.59
Offset:-6
Orientation:forward strand
Alignment:------CAAAGTCCAA-
AAAGGTCAAAGGTCAAC
 A C G T A C G T A C G T A C G T A C G T A C G T G T A C G T C A G T C A G T C A T A C G C G A T A T G C G A T C G C T A T G C A A C G T
G T C A C T G A C T G A A C T G A C T G A C G T A G T C C G T A C G T A C G T A A C T G A C T G A C G T A G T C C G T A C G T A A T G C

PB0014.1_Esrra_1/Jaspar

Match Rank:10
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----CAAAGTCCAA---
TATTCAAGGTCATGCGA
 A C G T A C G T A C G T A C G T G T A C G T C A G T C A G T C A T A C G C G A T A T G C G A T C G C T A T G C A A C G T A C G T A C G T
C A G T G T C A A C G T A G C T T A G C C T G A C T G A C A T G C A T G C A G T A G T C C T G A G C A T T C A G A G T C A C T G G T C A