Information for 5-CTGCAGGGTG (Motif 10)

A T G C C A G T A C T G A T G C C G T A C T A G C T A G C T A G A C G T A C T G
Reverse Opposite:
T G A C T G C A G A T C A G T C G A T C C G A T T A C G G T A C G T C A T A C G
p-value:1e-9
log p-value:-2.263e+01
Information Content per bp:1.625
Number of Target Sequences with motif29.0
Percentage of Target Sequences with motif3.29%
Number of Background Sequences with motif371.1
Percentage of Background Sequences with motif0.77%
Average Position of motif in Targets46.8 +/- 26.9bp
Average Position of motif in Background48.1 +/- 27.1bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:1
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--CTGCAGGGTG
CACAGCAGGGGG
 A C G T A C G T A T G C C A G T A C T G A T G C C G T A C T A G C T A G C T A G A C G T A C T G
T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:2
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---CTGCAGGGTG--
DCHCAGCAGGRGGCC
 A C G T A C G T A C G T A T G C C A G T A C T G A T G C C G T A C T A G C T A G C T A G A C G T A C T G A C G T A C G T
C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C

Klf1/MA0493.1/Jaspar

Match Rank:3
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:CTGCAGGGTG-----
----TGGGTGTGGCN
 A T G C C A G T A C T G A T G C C G T A C T A G C T A G C T A G A C G T A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G A T C T A G A C T G A C T G G A C T A C T G C A G T C T A G A C T G A G T C G A T C

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:4
Score:0.61
Offset:3
Orientation:forward strand
Alignment:CTGCAGGGTG-----
---NTGGGTGTGGCC
 A T G C C A G T A C T G A T G C C G T A C T A G C T A G C T A G A C G T A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T G A C C G A T A C T G A C T G A C T G G A C T A C T G A C G T A C T G A C T G G A T C G A T C

ZIC4/MA0751.1/Jaspar

Match Rank:5
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---CTGCAGGGTG--
NCNCAGCGGGGGGTC
 A C G T A C G T A C G T A T G C C A G T A C T G A T G C C G T A C T A G C T A G C T A G A C G T A C T G A C G T A C G T
C A T G T G A C C T G A G A T C G T C A T C A G G A T C C T A G C A T G C A T G C A T G C A T G C A T G A G C T T G A C

ZIC3/MA0697.1/Jaspar

Match Rank:6
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---CTGCAGGGTG--
NCGCAGCGGGGGGTC
 A C G T A C G T A C G T A T G C C A G T A C T G A T G C C G T A C T A G C T A G C T A G A C G T A C T G A C G T A C G T
C A T G G T A C C T A G G A T C T G C A T C A G A G T C C T A G A C T G A C T G C A T G C A T G C A T G A G C T T G A C

PB0205.1_Zic1_2/Jaspar

Match Rank:7
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----CTGCAGGGTG-
TNTCCTGCTGTGNNG
 A C G T A C G T A C G T A C G T A T G C C A G T A C T G A T G C C G T A C T A G C T A G C T A G A C G T A C T G A C G T
G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G

PB0206.1_Zic2_2/Jaspar

Match Rank:8
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----CTGCAGGGTG-
TCNCCTGCTGNGNNN
 A C G T A C G T A C G T A C G T A T G C C A G T A C T G A T G C C G T A C T A G C T A G C T A G A C G T A C T G A C G T
G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G

ZIC1/MA0696.1/Jaspar

Match Rank:9
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--CTGCAGGGTG--
CACAGCGGGGGGTC
 A C G T A C G T A T G C C A G T A C T G A T G C C G T A C T A G C T A G C T A G A C G T A C T G A C G T A C G T
T G A C C T G A A G T C T G C A T C A G A G T C C T A G C A T G T C A G C A T G C A T G C A T G A G C T T G A C

PB0091.1_Zbtb3_1/Jaspar

Match Rank:10
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----CTGCAGGGTG---
NNNANTGCAGTGCNNTT
 A C G T A C G T A C G T A C G T A T G C C A G T A C T G A T G C C G T A C T A G C T A G C T A G A C G T A C T G A C G T A C G T A C G T
T G A C T A C G T A C G T G C A T C G A A C G T T A C G G T A C C G T A A T C G A G C T C A T G T A G C T A C G T C G A G A C T G A C T