Information for 24-GTGTGTGAGAGAGAGA (Motif 46)

A T C G A C G T A C T G A C G T A C T G C G A T C T A G C G T A A T C G C G T A C T A G C G T A A C T G C G T A A C T G C G T A
Reverse Opposite:
A C G T A G T C A C G T A G T C A C G T A G T C C G A T A T G C C G A T A G T C C G T A A G T C C G T A A G T C C G T A A T G C
p-value:1e-6
log p-value:-1.423e+01
Information Content per bp:1.870
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.39%
Number of Background Sequences with motif1.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets31.4 +/- 7.9bp
Average Position of motif in Background40.6 +/- 11.9bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GATA:SCL(Zf,bHLH)/Ter119-SCL-ChIP-Seq(GSE18720)/Homer

Match Rank:1
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---GTGTGTGAGAGAGAGA-
CNGCTGNNGNNNNCAGATAA
 A C G T A C G T A C G T A T C G A C G T A C T G A C G T A C T G C G A T C T A G C G T A A T C G C G T A C T A G C G T A A C T G C G T A A C T G C G T A A C G T
T G A C C T A G A C T G T A G C C G A T A C T G A T G C C A T G A T C G A T C G A T C G T A G C C T G A T A G C G C T A A C T G C G T A A G C T C G T A C T G A

GATA1::TAL1/MA0140.2/Jaspar

Match Rank:2
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:GTGTGTGAGAGAGAGA--
CTGNNNNNNNCAGATAAG
 A T C G A C G T A C T G A C G T A C T G C G A T C T A G C G T A A T C G C G T A C T A G C G T A A C T G C G T A A C T G C G T A A C G T A C G T
T A G C C G A T A C T G A G T C C G A T A G T C A T G C C A G T A G T C T G C A T A G C C G T A A C T G C G T A A C G T C G T A C T G A A C T G

PB0130.1_Gm397_2/Jaspar

Match Rank:3
Score:0.53
Offset:-4
Orientation:reverse strand
Alignment:----GTGTGTGAGAGAGAGA
NNGCGTGTGTGCNGCN----
 A C G T A C G T A C G T A C G T A T C G A C G T A C T G A C G T A C T G C G A T C T A G C G T A A T C G C G T A C T A G C G T A A C T G C G T A A C T G C G T A
C A G T A C G T C T A G T G A C C A T G A C G T T A C G A G C T C A T G A G C T A C T G A G T C A G T C C A T G A G T C G A C T A C G T A C G T A C G T A C G T

PB0140.1_Irf6_2/Jaspar

Match Rank:4
Score:0.50
Offset:4
Orientation:reverse strand
Alignment:GTGTGTGAGAGAGAGA---
----NNNACCGAGAGTNNN
 A T C G A C G T A C T G A C G T A C T G C G A T C T A G C G T A A T C G C G T A C T A G C G T A A C T G C G T A A C T G C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A T C G G A C T C A T G G T C A A G T C G A T C C T A G T C G A T A C G G T C A C A T G C G A T T C A G T A C G A C G T

bZIP:IRF(bZIP,IRF)/Th17-BatF-ChIP-Seq(GSE39756)/Homer

Match Rank:5
Score:0.50
Offset:1
Orientation:reverse strand
Alignment:GTGTGTGAGAGAGAGA---
-WNAGTCADAVTGAAACTN
 A T C G A C G T A C T G A C G T A C T G C G A T C T A G C G T A A T C G C G T A C T A G C G T A A C T G C G T A A C T G C G T A A C G T A C G T A C G T
A C G T G C A T T A C G C G T A A T C G G C A T T A G C G C T A C G T A G C T A T G C A C G A T T C A G C T G A T C G A T C G A T A G C G A C T T C A G

MGA/MA0801.1/Jaspar

Match Rank:6
Score:0.49
Offset:0
Orientation:forward strand
Alignment:GTGTGTGAGAGAGAGA
AGGTGTGA--------
 A T C G A C G T A C T G A C G T A C T G C G A T C T A G C G T A A T C G C G T A C T A G C G T A A C T G C G T A A C T G C G T A
C T G A T C A G A T C G A G C T C T A G G A C T A C T G C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:7
Score:0.49
Offset:2
Orientation:reverse strand
Alignment:GTGTGTGAGAGAGAGA
--AGGTGNCAGACAG-
 A T C G A C G T A C T G A C G T A C T G C G A T C T A G C G T A A T C G C G T A C T A G C G T A A C T G C G T A A C T G C G T A
A C G T A C G T C T G A C T A G A T C G C G A T A T C G G T C A A T G C C G T A A C T G T G C A A G T C C G T A A T C G A C G T

Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.49
Offset:1
Orientation:forward strand
Alignment:GTGTGTGAGAGAGAGA
-TGCGTGGGYG-----
 A T C G A C G T A C T G A C G T A C T G C G A T C T A G C G T A A T C G C G T A C T A G C G T A A C T G C G T A A C T G C G T A
A C G T C A G T T C A G G A T C A C T G A C G T C T A G A C T G A C T G G A C T C T A G A C G T A C G T A C G T A C G T A C G T

IRF:BATF(IRF:bZIP)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:9
Score:0.49
Offset:2
Orientation:reverse strand
Alignment:GTGTGTGAGAGAGAGA-
--BAGTCATANTGAAAG
 A T C G A C G T A C T G A C G T A C T G C G A T C T A G C G T A A T C G C G T A C T A G C G T A A C T G C G T A A C T G C G T A A C G T
A C G T A C G T A C T G C G T A A T C G C G A T T G A C C G T A C G A T G C T A G T C A C G A T T C A G C T G A C T G A C T G A T A C G

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:10
Score:0.48
Offset:5
Orientation:reverse strand
Alignment:GTGTGTGAGAGAGAGA-
-----TGAGTGACAGSC
 A T C G A C G T A C T G A C G T A C T G C G A T C T A G C G T A A T C G C G T A C T A G C G T A A C T G C G T A A C T G C G T A A C G T
A C G T A C G T A C G T A C G T A C G T C G A T A T C G T C G A A C T G C G A T A T C G C T G A A G T C C G T A A T C G T A C G G A T C