Information for 3-CGCCCCCTAGTGBTAD (Motif 3)

A G T C A C T G A G T C A G T C A G T C A G T C A G T C A C G T C G T A A T C G A C G T A C T G A T C G A G C T G T C A C G T A
Reverse Opposite:
G C A T A C G T C T G A T A G C A G T C G T C A A T G C A C G T C G T A A C T G C T A G A C T G A C T G A C T G G T A C C T A G
p-value:1e-16
log p-value:-3.835e+01
Information Content per bp:1.784
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif1.04%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets60.1 +/- 20.2bp
Average Position of motif in Background18.7 +/- 5.5bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CTCF/MA0139.1/Jaspar

Match Rank:1
Score:0.82
Offset:-3
Orientation:reverse strand
Alignment:---CGCCCCCTAGTGBTAD
TAGCGCCCCCTGGTGGCCA
 A C G T A C G T A C G T A G T C A C T G A G T C A G T C A G T C A G T C A G T C A C G T C G T A A T C G A C G T A C T G A T C G A G C T G T C A C G T A
A G C T C T G A A T C G G A T C C A T G G T A C G A T C G T A C G A T C G A T C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.81
Offset:-6
Orientation:forward strand
Alignment:------CGCCCCCTAGTGBTAD
CNNBRGCGCCCCCTGSTGGC--
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C T G A G T C A G T C A G T C A G T C A G T C A C G T C G T A A T C G A C G T A C T G A T C G A G C T G T C A C G T A
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C A C G T A C G T

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:3
Score:0.79
Offset:-4
Orientation:forward strand
Alignment:----CGCCCCCTAGTGBTAD
ANAGTGCCACCTGGTGGCCA
 A C G T A C G T A C G T A C G T A G T C A C T G A G T C A G T C A G T C A G T C A G T C A C G T C G T A A T C G A C G T A C T G A T C G A G C T G T C A C G T A
T G C A A G C T C T G A A T C G G A C T C T A G G T A C G A T C G T C A A G T C G T A C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

PB0076.1_Sp4_1/Jaspar

Match Rank:4
Score:0.67
Offset:-5
Orientation:forward strand
Alignment:-----CGCCCCCTAGTGBTAD
GGTCCCGCCCCCTTCTC----
 A C G T A C G T A C G T A C G T A C G T A G T C A C T G A G T C A G T C A G T C A G T C A G T C A C G T C G T A A T C G A C G T A C T G A T C G A G C T G T C A C G T A
A C T G C A T G G A C T G T A C G T A C A G T C C T A G A G T C A T G C A G T C G T A C A G T C G A C T G A C T T A G C A G C T A G T C A C G T A C G T A C G T A C G T

MZF1(var.2)/MA0057.1/Jaspar

Match Rank:5
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:CGCCCCCTAGTGBTAD
TTCCCCCTAC------
 A G T C A C T G A G T C A G T C A G T C A G T C A G T C A C G T C G T A A T C G A C G T A C T G A T C G A G C T G T C A C G T A
A G C T G A C T G T A C G T A C A T G C G T A C G T A C A C G T G T A C T A G C A C G T A C G T A C G T A C G T A C G T A C G T

PB0128.1_Gcm1_2/Jaspar

Match Rank:6
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--CGCCCCCTAGTGBTAD
NTCNTCCCCTATNNGNN-
 A C G T A C G T A G T C A C T G A G T C A G T C A G T C A G T C A G T C A C G T C G T A A T C G A C G T A C T G A T C G A G C T G T C A C G T A
T G A C C A G T A G T C T A G C A G C T A G T C T A G C G T A C G T A C A G C T C T G A A G C T C A T G A T G C T A C G G T A C G C T A A C G T

KLF14(Zf)/HEK293-KLF14.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----CGCCCCCTAGTGBTAD
GCCMCGCCCMCY--------
 A C G T A C G T A C G T A C G T A G T C A C T G A G T C A G T C A G T C A G T C A G T C A C G T C G T A A T C G A C G T A C T G A T C G A G C T G T C A C G T A
T A C G A G T C G A T C T G A C G A T C C T A G A G T C A G T C A G T C G T C A A G T C G A T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

SP8/MA0747.1/Jaspar

Match Rank:8
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----CGCCCCCTAGTGBTAD
GCCACGCCCACT--------
 A C G T A C G T A C G T A C G T A G T C A C T G A G T C A G T C A G T C A G T C A G T C A C G T C G T A A T C G A C G T A C T G A T C G A G C T G T C A C G T A
T C A G G T A C G T A C G T C A G T A C A C T G T A G C T A G C A G T C T G C A A G T C G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

KLF16/MA0741.1/Jaspar

Match Rank:9
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----CGCCCCCTAGTGBTAD
GCCACGCCCCC---------
 A C G T A C G T A C G T A C G T A G T C A C T G A G T C A G T C A G T C A G T C A G T C A C G T C G T A A T C G A C G T A C T G A T C G A G C T G T C A C G T A
T C A G G T A C G T A C T G C A G T A C C T A G G T A C T A G C G A T C G T A C G A T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

KLF14/MA0740.1/Jaspar

Match Rank:10
Score:0.57
Offset:-5
Orientation:forward strand
Alignment:-----CGCCCCCTAGTGBTAD
GGCCACGCCCCCTT-------
 A C G T A C G T A C G T A C G T A C G T A G T C A C T G A G T C A G T C A G T C A G T C A G T C A C G T C G T A A T C G A C G T A C T G A T C G A G C T G T C A C G T A
C A T G T C A G G T A C A G T C T G C A G A T C T C A G A T G C A G T C A G T C G T A C G A T C G A C T G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T