Information for 13-CTAWTTGCAAATA (Motif 26)

G A T C A C G T C G T A C G T A A C G T A C G T A C T G A G T C C G T A G T C A C G T A A C G T G T C A
Reverse Opposite:
A C G T G T C A G C A T A C G T A C G T A C T G A G T C C G T A C G T A C G A T A C G T C G T A C T A G
p-value:1e-8
log p-value:-1.872e+01
Information Content per bp:1.821
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif1.04%
Number of Background Sequences with motif17.3
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets40.4 +/- 22.4bp
Average Position of motif in Background55.0 +/- 26.2bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:1
Score:0.72
Offset:2
Orientation:reverse strand
Alignment:CTAWTTGCAAATA
--ATTTGCATAT-
 G A T C A C G T C G T A C G T A A C G T A C G T A C T G A G T C C G T A G T C A C G T A A C G T G T C A
A C G T A C G T G C T A C G A T G A C T A C G T C T A G G A T C G T C A C G A T C G T A C A G T A C G T

Msx3/MA0709.1/Jaspar

Match Rank:2
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:CTAWTTGCAAATA
NTAATTGN-----
 G A T C A C G T C G T A C G T A A C G T A C G T A C T G A G T C C G T A G T C A C G T A A C G T G T C A
A G C T G C A T C T G A C G T A A C G T A G C T C T A G A T C G A C G T A C G T A C G T A C G T A C G T

MSX2/MA0708.1/Jaspar

Match Rank:3
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:CTAWTTGCAAATA
NTAATTGG-----
 G A T C A C G T C G T A C G T A A C G T A C G T A C T G A G T C C G T A G T C A C G T A A C G T G T C A
A G C T C A G T T C G A C G T A A C G T C A G T C T A G A T C G A C G T A C G T A C G T A C G T A C G T

MSX1/MA0666.1/Jaspar

Match Rank:4
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:CTAWTTGCAAATA
NTAATTGG-----
 G A T C A C G T C G T A C G T A A C G T A C G T A C T G A G T C C G T A G T C A C G T A A C G T G T C A
A G T C A C G T T G C A G T C A A C G T A C G T C T A G T A C G A C G T A C G T A C G T A C G T A C G T

Dlx2/MA0885.1/Jaspar

Match Rank:5
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:CTAWTTGCAAATA
NTAATTGN-----
 G A T C A C G T C G T A C G T A A C G T A C G T A C T G A G T C C G T A G T C A C G T A A C G T G T C A
C G A T G C A T T G C A C G T A C A G T C A G T C T A G A T G C A C G T A C G T A C G T A C G T A C G T

Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer

Match Rank:6
Score:0.69
Offset:0
Orientation:forward strand
Alignment:CTAWTTGCAAATA
CTAATKGV-----
 G A T C A C G T C G T A C G T A A C G T A C G T A C T G A G T C C G T A G T C A C G T A A C G T G T C A
A G T C C G A T C T G A C G T A A C G T C A G T T C A G T G A C A C G T A C G T A C G T A C G T A C G T

BARX1/MA0875.1/Jaspar

Match Rank:7
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:CTAWTTGCAAATA
NTAATTGN-----
 G A T C A C G T C G T A C G T A A C G T A C G T A C T G A G T C C G T A G T C A C G T A A C G T G T C A
A G T C A C G T C G T A C G T A A C G T A C G T C T A G A G T C A C G T A C G T A C G T A C G T A C G T

POU2F2/MA0507.1/Jaspar

Match Rank:8
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-CTAWTTGCAAATA
TTCATTTGCATAT-
 A C G T G A T C A C G T C G T A C G T A A C G T A C G T A C T G A G T C C G T A G T C A C G T A A C G T G T C A
G A C T C A G T G T A C G C T A A C G T G C A T A C G T C T A G A G T C G T C A A G C T C T G A G C A T A C G T

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.68
Offset:2
Orientation:forward strand
Alignment:CTAWTTGCAAATA
--ATTTGCATAA-
 G A T C A C G T C G T A C G T A A C G T A C G T A C T G A G T C C G T A G T C A C G T A A C G T G T C A
A C G T A C G T C G T A A C G T A G C T C G A T C T A G G T A C C G T A A G C T C G T A G C T A A C G T

PH0063.1_Hoxb8/Jaspar

Match Rank:10
Score:0.67
Offset:-4
Orientation:reverse strand
Alignment:----CTAWTTGCAAATA
TTTATTAATTGCNNGN-
 A C G T A C G T A C G T A C G T G A T C A C G T C G T A C G T A A C G T A C G T A C T G A G T C C G T A G T C A C G T A A C G T G T C A
G C A T G A C T A C G T C T G A C G A T G C A T C G T A C G T A A C G T C A G T C T A G G A T C G T A C T C A G A T C G C G A T A C G T