Information for 2-ACATTTTATGATATTD (Motif 2)

C G T A A T G C C G T A A G C T A C G T C G A T A C G T C G T A C G A T A C T G C T G A A C G T T G C A A C G T A C G T C A G T
Reverse Opposite:
G T C A G T C A C G T A A C G T C G T A A G C T G T A C C G T A C G A T C G T A C G T A C G T A C T G A A C G T A T C G A C G T
p-value:1e-16
log p-value:-3.835e+01
Information Content per bp:1.813
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif1.04%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets49.6 +/- 23.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0075.1_Hoxd10/Jaspar

Match Rank:1
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--ACATTTTATGATATTD
NTNAATTTTATTGNATT-
 A C G T A C G T C G T A A T G C C G T A A G C T A C G T C G A T A C G T C G T A C G A T A C T G C T G A A C G T T G C A A C G T A C G T C A G T
C G T A G C A T G C T A G C T A C T G A A G C T C G A T C G A T C G A T C T G A G C A T C A G T C T A G A G T C T G C A G A C T A C G T A C G T

CDX2/MA0465.1/Jaspar

Match Rank:2
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:ACATTTTATGATATTD
---TTTTATGGCTN--
 C G T A A T G C C G T A A G C T A C G T C G A T A C G T C G T A C G A T A C T G C T G A A C G T T G C A A C G T A C G T C A G T
A C G T A C G T A C G T A G C T A C G T A C G T A C G T C G T A A C G T C A T G C T A G A G T C G A C T A G C T A C G T A C G T

Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer

Match Rank:3
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:ACATTTTATGATATTD
--NTTTTATGAC----
 C G T A A T G C C G T A A G C T A C G T C G A T A C G T C G T A C G A T A C T G C T G A A C G T T G C A A C G T A C G T C A G T
A C G T A C G T C T G A C G A T A C G T A C G T A C G T C G T A A C G T C A T G C T G A A G T C A C G T A C G T A C G T A C G T

PH0068.1_Hoxc13/Jaspar

Match Rank:4
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:ACATTTTATGATATTD
NAATTTTACGAGNTNN
 C G T A A T G C C G T A A G C T A C G T C G A T A C G T C G T A C G A T A C T G C T G A A C G T T G C A A C G T A C G T C A G T
G C T A C T G A C G T A C G A T C G A T C G A T C G A T C T G A G A T C C T A G C T G A A T C G T G A C C G A T C G A T C G A T

PH0012.1_Cdx1/Jaspar

Match Rank:5
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:ACATTTTATGATATTD
NAATTTTATTACCTNN
 C G T A A T G C C G T A A G C T A C G T C G A T A C G T C G T A C G A T A C T G C T G A A C G T T G C A A C G T A C G T C A G T
C G A T G T C A T C G A C G A T C G A T C G A T C G A T C G T A A G C T C A G T C T G A A G T C G A T C A C G T G A C T G C T A

PH0013.1_Cdx2/Jaspar

Match Rank:6
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:ACATTTTATGATATTD
NAATTTTATTACCNNN
 C G T A A T G C C G T A A G C T A C G T C G A T A C G T C G T A C G A T A C T G C T G A A C G T T G C A A C G T A C G T C A G T
C T G A G T C A C T G A C G A T C G A T C G A T C G A T C G T A A G C T C A G T C T G A A G T C G A T C A C G T A G C T G C A T

HOXC10/MA0905.1/Jaspar

Match Rank:7
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:ACATTTTATGATATTD
--NTTTTACGAC----
 C G T A A T G C C G T A A G C T A C G T C G A T A C G T C G T A C G A T A C T G C T G A A C G T T G C A A C G T A C G T C A G T
A C G T A C G T C G T A C G A T G C A T G C A T C G A T C G T A G A T C C A T G C T G A A G T C A C G T A C G T A C G T A C G T

CDX1/MA0878.1/Jaspar

Match Rank:8
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:ACATTTTATGATATTD
---TTTTATTGC----
 C G T A A T G C C G T A A G C T A C G T C G A T A C G T C G T A C G A T A C T G C T G A A C G T T G C A A C G T A C G T C A G T
A C G T A C G T A C G T C A G T C G A T G C A T C G A T C G T A A G C T C A G T C T A G A G T C A C G T A C G T A C G T A C G T

PH0065.1_Hoxc10/Jaspar

Match Rank:9
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:ACATTTTATGATATTD
ANNTTTTACGACNTNN
 C G T A A T G C C G T A A G C T A C G T C G A T A C G T C G T A C G A T A C T G C T G A A C G T T G C A A C G T A C G T C A G T
T G C A T A G C C T A G G C A T C A G T C G A T C G A T C G T A A G T C A C T G C T G A A G T C G A C T G C A T G C A T C G T A

PH0047.1_Hoxa11/Jaspar

Match Rank:10
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:ACATTTTATGATATTD
NNGTTTTACGACTTTA
 C G T A A T G C C G T A A G C T A C G T C G A T A C G T C G T A C G A T A C T G C T G A A C G T T G C A A C G T A C G T C A G T
G T C A G A C T C T A G C G A T C A G T C G A T C G A T C G T A A G T C C A T G C T G A A G T C G A C T C G A T G A C T C G T A