Information for 2-TGTGTTTACTTAAMMA (Motif 5)

C A G T A C T G C G A T C T A G A G C T A C G T A C G T C G T A G A T C C G A T A C G T C T G A T C G A G T C A G T A C C T G A
Reverse Opposite:
G A C T C A T G A C G T A G C T G A C T T G C A C G T A C T A G G C A T T C G A C G T A T C G A A G T C C G T A T G A C G T C A
p-value:1e-15
log p-value:-3.606e+01
Information Content per bp:1.627
Number of Target Sequences with motif30.0
Percentage of Target Sequences with motif3.67%
Number of Background Sequences with motif245.6
Percentage of Background Sequences with motif0.51%
Average Position of motif in Targets54.7 +/- 24.4bp
Average Position of motif in Background53.3 +/- 28.9bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:1
Score:0.87
Offset:2
Orientation:reverse strand
Alignment:TGTGTTTACTTAAMMA
--TGTTTACTTT----
 C A G T A C T G C G A T C T A G A G C T A C G T A C G T C G T A G A T C C G A T A C G T C T G A T C G A G T C A G T A C C T G A
A C G T A C G T A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T A C G T A C G T A C G T A C G T

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:2
Score:0.87
Offset:2
Orientation:reverse strand
Alignment:TGTGTTTACTTAAMMA
--TGTTTACTTT----
 C A G T A C T G C G A T C T A G A G C T A C G T A C G T C G T A G A T C C G A T A C G T C T G A T C G A G T C A G T A C C T G A
A C G T A C G T A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T A C G T A C G T A C G T A C G T

FOXC2/MA0846.1/Jaspar

Match Rank:3
Score:0.85
Offset:0
Orientation:reverse strand
Alignment:TGTGTTTACTTAAMMA
TTTGTTTACTTA----
 C A G T A C T G C G A T C T A G A G C T A C G T A C G T C G T A G A T C C G A T A C G T C T G A T C G A G T C A G T A C C T G A
C G A T C G A T G A C T T C A G G A C T C A G T C A G T C T G A A G T C C G A T G A C T C G T A A C G T A C G T A C G T A C G T

MF0005.1_Forkhead_class/Jaspar

Match Rank:4
Score:0.85
Offset:2
Orientation:forward strand
Alignment:TGTGTTTACTTAAMMA
--TGTTTATTT-----
 C A G T A C T G C G A T C T A G A G C T A C G T A C G T C G T A G A T C C G A T A C G T C T G A T C G A G T C A G T A C C T G A
A C G T A C G T G C A T C T A G A G C T G A C T C A G T C T G A A G C T C A G T A G C T A C G T A C G T A C G T A C G T A C G T

FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer

Match Rank:5
Score:0.84
Offset:2
Orientation:forward strand
Alignment:TGTGTTTACTTAAMMA
--TRTTTACTTW----
 C A G T A C T G C G A T C T A G A G C T A C G T A C G T C G T A G A T C C G A T A C G T C T G A T C G A G T C A G T A C C T G A
A C G T A C G T A C G T C T A G A G C T A C G T A C G T C T G A A G T C G A C T A G C T C G T A A C G T A C G T A C G T A C G T

FOXP2/MA0593.1/Jaspar

Match Rank:6
Score:0.84
Offset:0
Orientation:reverse strand
Alignment:TGTGTTTACTTAAMMA
TNTGTTTACTT-----
 C A G T A C T G C G A T C T A G A G C T A C G T A C G T C G T A G A T C C G A T A C G T C T G A T C G A G T C A G T A C C T G A
G A C T A G C T A C G T C T A G A C G T A C G T A C G T C G T A A G T C G C A T G A C T A C G T A C G T A C G T A C G T A C G T

Foxa2/MA0047.2/Jaspar

Match Rank:7
Score:0.83
Offset:2
Orientation:forward strand
Alignment:TGTGTTTACTTAAMMA
--TGTTTACTTAGG--
 C A G T A C T G C G A T C T A G A G C T A C G T A C G T C G T A G A T C C G A T A C G T C T G A T C G A G T C A G T A C C T G A
A C G T A C G T A C G T C T A G A C G T A C G T A C G T T C G A A G T C G C A T A G C T C G T A C A T G A T C G A C G T A C G T

FOXA1/MA0148.3/Jaspar

Match Rank:8
Score:0.82
Offset:-2
Orientation:forward strand
Alignment:--TGTGTTTACTTAAMMA
TCCATGTTTACTTTG---
 A C G T A C G T C A G T A C T G C G A T C T A G A G C T A C G T A C G T C G T A G A T C C G A T A C G T C T G A T C G A G T C A G T A C C T G A
G A C T A G T C A T G C G C T A C G A T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T C A T G A C G T A C G T A C G T

FOXP1/MA0481.1/Jaspar

Match Rank:9
Score:0.81
Offset:-1
Orientation:reverse strand
Alignment:-TGTGTTTACTTAAMMA
CTTTGTTTACTTTTN--
 A C G T C A G T A C T G C G A T C T A G A G C T A C G T A C G T C G T A G A T C C G A T A C G T C T G A T C G A G T C A G T A C C T G A
A G T C G C A T A C G T A C G T A C T G A C G T A C G T A C G T C G T A A G T C G A C T A G C T G C A T C G A T C A T G A C G T A C G T

Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer

Match Rank:10
Score:0.81
Offset:1
Orientation:reverse strand
Alignment:TGTGTTTACTTAAMMA
-NTGTTTAYATWW---
 C A G T A C T G C G A T C T A G A G C T A C G T A C G T C G T A G A T C C G A T A C G T C T G A T C G A G T C A G T A C C T G A
A C G T C A G T A C G T C T A G A C G T A C G T A C G T C G T A A G C T T G C A G A C T C G T A C G T A A C G T A C G T A C G T