Information for 4-AGGCAATTAC (Motif 10)

C T G A C T A G A T C G G A T C G T C A G C T A C G A T G A C T T C G A G A T C
Reverse Opposite:
C T A G A G C T C T G A C G T A C G A T A C G T C T A G A T G C G A T C A G C T
p-value:1e-11
log p-value:-2.736e+01
Information Content per bp:1.682
Number of Target Sequences with motif38.0
Percentage of Target Sequences with motif4.65%
Number of Background Sequences with motif550.8
Percentage of Background Sequences with motif1.15%
Average Position of motif in Targets52.2 +/- 25.6bp
Average Position of motif in Background49.0 +/- 28.5bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0024.1_Dlx5/Jaspar

Match Rank:1
Score:0.76
Offset:-3
Orientation:reverse strand
Alignment:---AGGCAATTAC---
NANNGNTAATTACCNN
 A C G T A C G T A C G T C T G A C T A G A T C G G A T C G T C A G C T A C G A T G A C T T C G A G A T C A C G T A C G T A C G T
A T G C T C G A A C T G T G C A T C A G A T G C G A C T G T C A C G T A G A C T C A G T C T G A A G T C A G T C A T G C T A G C

Nobox/MA0125.1/Jaspar

Match Rank:2
Score:0.76
Offset:1
Orientation:reverse strand
Alignment:AGGCAATTAC
-ACCAATTA-
 C T G A C T A G A T C G G A T C G T C A G C T A C G A T G A C T T C G A G A T C
A C G T T C G A A T G C G A T C G T C A G T C A A C G T C G A T C T G A A C G T

Dlx4/MA0881.1/Jaspar

Match Rank:3
Score:0.75
Offset:2
Orientation:forward strand
Alignment:AGGCAATTAC
--CCAATTAC
 C T G A C T A G A T C G G A T C G T C A G C T A C G A T G A C T T C G A G A T C
A C G T A C G T T A G C G A T C G T C A G T C A G C A T A G C T G C T A G T A C

PH0053.1_Hoxa6/Jaspar

Match Rank:4
Score:0.75
Offset:-3
Orientation:reverse strand
Alignment:---AGGCAATTAC---
NTNAGGTAATTACCTT
 A C G T A C G T A C G T C T G A C T A G A T C G G A T C G T C A G C T A C G A T G A C T T C G A G A T C A C G T A C G T A C G T
G T C A C G A T C A G T C T G A C T A G A C T G G A C T G T C A G C T A C A G T C A G T C T G A G T A C G A T C C A G T A G C T

PH0009.1_Bsx/Jaspar

Match Rank:5
Score:0.75
Offset:-3
Orientation:reverse strand
Alignment:---AGGCAATTAC---
NTNAGNTAATTACCTN
 A C G T A C G T A C G T C T G A C T A G A T C G G A T C G T C A G C T A C G A T G A C T T C G A G A T C A C G T A C G T A C G T
G A T C G A C T A T C G T C G A C T A G A T C G G A C T T G C A G T C A A C G T A C G T C T G A G T A C G A T C A C G T A C T G

Dlx3/MA0880.1/Jaspar

Match Rank:6
Score:0.74
Offset:2
Orientation:forward strand
Alignment:AGGCAATTAC
--CCAATTAC
 C T G A C T A G A T C G G A T C G T C A G C T A C G A T G A C T T C G A G A T C
A C G T A C G T T A G C G A T C G T C A G T C A G C A T A G C T G C T A G T A C

Dlx2/MA0885.1/Jaspar

Match Rank:7
Score:0.74
Offset:2
Orientation:forward strand
Alignment:AGGCAATTAC
--GCAATTAA
 C T G A C T A G A T C G G A T C G T C A G C T A C G A T G A C T T C G A G A T C
A C G T A C G T T A C G G A T C G T C A G T C A A C G T A C G T C G T A G C T A

PH0061.1_Hoxb6/Jaspar

Match Rank:8
Score:0.74
Offset:-1
Orientation:reverse strand
Alignment:-AGGCAATTAC-----
NNNGTAATTACNNATA
 A C G T C T G A C T A G A T C G G A T C G T C A G C T A C G A T G A C T T C G A G A T C A C G T A C G T A C G T A C G T A C G T
T C G A G T C A A T C G C A T G A G C T G T C A C G T A C G A T C A G T C T G A T G A C T A G C G T C A G C T A C G A T C G T A

MSX1/MA0666.1/Jaspar

Match Rank:9
Score:0.74
Offset:2
Orientation:forward strand
Alignment:AGGCAATTAC
--CCAATTAG
 C T G A C T A G A T C G G A T C G T C A G C T A C G A T G A C T T C G A G A T C
A C G T A C G T A T G C G A T C T G C A G T C A A C G T A C G T T G C A T C A G

DLX6/MA0882.1/Jaspar

Match Rank:10
Score:0.74
Offset:2
Orientation:forward strand
Alignment:AGGCAATTAC
--CCAATTAC
 C T G A C T A G A T C G G A T C G T C A G C T A C G A T G A C T T C G A G A T C
A C G T A C G T T A G C G A T C G T C A G T C A C G A T A G C T G C T A G T A C