Information for 4-CCMTGAACTCTGAACA (Motif 4)

A G T C G T A C G T A C C G A T C A T G T C G A G T C A A G T C C G A T A G T C A C G T A C T G C T G A C G T A A G T C G T C A
Reverse Opposite:
A C G T A C T G A C G T A G C T G T A C C G T A A C T G C G T A A C T G A C G T A C G T G A T C C G T A C A T G A C T G C T A G
p-value:1e-16
log p-value:-3.779e+01
Information Content per bp:1.760
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.94%
Number of Background Sequences with motif0.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets63.7 +/- 20.5bp
Average Position of motif in Background48.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:1
Score:0.69
Offset:3
Orientation:reverse strand
Alignment:CCMTGAACTCTGAACA---
---TGGACTTTGNNCTNTG
 A G T C G T A C G T A C C G A T C A T G T C G A G T C A A G T C C G A T A G T C A C G T A C T G C T G A C G T A A G T C G T C A A C G T A C G T A C G T
A C G T A C G T A C G T C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T C T A G T C G A G T A C G A T C G A C T A G T C C G A T C A T G

HNF4G/MA0484.1/Jaspar

Match Rank:2
Score:0.68
Offset:3
Orientation:reverse strand
Alignment:CCMTGAACTCTGAACA--
---TGGACTTTGNNCTCN
 A G T C G T A C G T A C C G A T C A T G T C G A G T C A A G T C C G A T A G T C A C G T A C T G C T G A C G T A A G T C G T C A A C G T A C G T
A C G T A C G T A C G T C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T T C A G T C A G G T C A G A T C G A C T A G T C G C A T

TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer

Match Rank:3
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:CCMTGAACTCTGAACA-
---TGACCTTTGACCTC
 A G T C G T A C G T A C C G A T C A T G T C G A G T C A A G T C C G A T A G T C A C G T A C T G C T G A C G T A A G T C G T C A A C G T
A C G T A C G T A C G T G A C T T A C G T G C A G T A C G A T C A G C T G A C T G A C T T A C G T G C A G T A C G A T C G A C T A G T C

Hnf4a/MA0114.3/Jaspar

Match Rank:4
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:CCMTGAACTCTGAACA-
-ATTGGACTTTGACCCC
 A G T C G T A C G T A C C G A T C A T G T C G A G T C A A G T C C G A T A G T C A C G T A C T G C T G A C G T A A G T C G T C A A C G T
A C G T C T G A A G C T G A C T T C A G T C A G T G C A T G A C A G C T G A C T A G C T T C A G G T C A G T A C G A T C A G T C A G T C

RXRG/MA0856.1/Jaspar

Match Rank:5
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:CCMTGAACTCTGAACA-
---TGACCTTTGACCCC
 A G T C G T A C G T A C C G A T C A T G T C G A G T C A A G T C C G A T A G T C A C G T A C T G C T G A C G T A A G T C G T C A A C G T
A C G T A C G T A C G T A G C T T C A G T G C A G T A C G T A C G A C T G A C T G A C T T C A G T G C A G T A C G T A C A G T C A G T C

RXRB/MA0855.1/Jaspar

Match Rank:6
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:CCMTGAACTCTGAACA-
---TGACCTTTGACCCC
 A G T C G T A C G T A C C G A T C A T G T C G A G T C A A G T C C G A T A G T C A C G T A C T G C T G A C G T A A G T C G T C A A C G T
A C G T A C G T A C G T A G C T T C A G T G C A G T A C G T A C A G C T G A C T G A C T T C A G T G C A G T A C G A T C A G T C A G T C

Rxra/MA0512.2/Jaspar

Match Rank:7
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:CCMTGAACTCTGAACA-
---TGACCTTTGACCCC
 A G T C G T A C G T A C C G A T C A T G T C G A G T C A A G T C C G A T A G T C A C G T A C T G C T G A C G T A A G T C G T C A A C G T
A C G T A C G T A C G T A G C T T C A G T G C A T G A C T A G C A G C T G A C T A G C T T C A G T G C A G T A C G T A C A G T C A G T C

NR2C2/MA0504.1/Jaspar

Match Rank:8
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:CCMTGAACTCTGAACA--
---TGACCTCTGACCCCN
 A G T C G T A C G T A C C G A T C A T G T C G A G T C A A G T C C G A T A G T C A C G T A C T G C T G A C G T A A G T C G T C A A C G T A C G T
A C G T A C G T A C G T G A C T T C A G T G C A G T A C A G T C A G C T A G T C G A C T T A C G G T C A G T A C T G A C A G T C A G T C A C G T

Nr2f6/MA0677.1/Jaspar

Match Rank:9
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:CCMTGAACTCTGAACA-
---TGACCTTTGACCTN
 A G T C G T A C G T A C C G A T C A T G T C G A G T C A A G T C C G A T A G T C A C G T A C T G C T G A C G T A A G T C G T C A A C G T
A C G T A C G T A C G T A G C T T C A G T G C A G T A C G T A C A G C T G A C T G A C T T C A G T G C A G T A C G T A C A G C T A G T C

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:CCMTGAACTCTGAACA
--CTGACCTTTG----
 A G T C G T A C G T A C C G A T C A T G T C G A G T C A A G T C C G A T A G T C A C G T A C T G C T G A C G T A A G T C G T C A
A C G T A C G T A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G A C G T A C G T A C G T A C G T