Information for 12-CCTGATRWTCTGG (Motif 17)

A G T C A G T C C G A T A C T G C T G A A C G T C T A G C G T A G A C T A G T C A G C T A C T G T A C G
Reverse Opposite:
A T G C A G T C C T G A A C T G C G T A G C A T G A T C T G C A A G C T A G T C C G T A C T A G C T A G
p-value:1e-11
log p-value:-2.708e+01
Information Content per bp:1.721
Number of Target Sequences with motif20.0
Percentage of Target Sequences with motif2.68%
Number of Background Sequences with motif158.8
Percentage of Background Sequences with motif0.33%
Average Position of motif in Targets42.0 +/- 23.0bp
Average Position of motif in Background48.3 +/- 26.8bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:1
Score:0.59
Offset:6
Orientation:forward strand
Alignment:CCTGATRWTCTGG---
------GGTCTGGCAT
 A G T C A G T C C G A T A C T G C T G A A C G T C T A G C G T A G A C T A G T C A G C T A C T G T A C G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T

ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer

Match Rank:2
Score:0.56
Offset:-5
Orientation:reverse strand
Alignment:-----CCTGATRWTCTGG
RYHYACCTGB--------
 A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G A T A C T G C T G A A C G T C T A G C G T A G A C T A G T C A G C T A C T G T A C G
T C A G A G C T G C T A A G T C C G T A G T A C A T G C A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

GRHL2(CP2)/HBE-GRHL2-ChIP-Seq(GSE46194)/Homer

Match Rank:3
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---CCTGATRWTCTGG----
AAACYKGTTWDACMRGTTTB
 A C G T A C G T A C G T A G T C A G T C C G A T A C T G C T G A A C G T C T A G C G T A G A C T A G T C A G C T A C T G T A C G A C G T A C G T A C G T A C G T
C T G A C T G A C T G A A T G C G A T C C A T G A C T G G A C T G A C T G C A T C G T A C G T A A G T C G T A C C T G A A T C G G C A T G A C T G A C T A G C T

SNAI2/MA0745.1/Jaspar

Match Rank:4
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---CCTGATRWTCTGG
NCACCTGTN-------
 A C G T A C G T A C G T A G T C A G T C C G A T A C T G C T G A A C G T C T A G C G T A G A C T A G T C A G C T A C T G T A C G
T C G A G T A C C T G A G A T C G A T C C G A T C A T G G A C T G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:5
Score:0.54
Offset:-4
Orientation:forward strand
Alignment:----CCTGATRWTCTGG
NNCACCTGNN-------
 A C G T A C G T A C G T A C G T A G T C A G T C C G A T A C T G C T G A A C G T C T A G C G T A G A C T A G T C A G C T A C T G T A C G
A T G C T G C A A G T C C G T A A G T C A G T C A C G T A C T G A T G C G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:6
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--CCTGATRWTCTGG
GTCATGCHTGRCTGS
 A C G T A C G T A G T C A G T C C G A T A C T G C T G A A C G T C T A G C G T A G A C T A G T C A G C T A C T G T A C G
A C T G A G C T A G T C G T C A A G C T T C A G A T G C G A T C G C A T A T C G T C G A T A G C C G A T C A T G T A G C

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:7
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:CCTGATRWTCTGG----
CCNNACCATCTGGCCTN
 A G T C A G T C C G A T A C T G C T G A A C G T C T A G C G T A G A C T A G T C A G C T A C T G T A C G A C G T A C G T A C G T A C G T
A G T C T A G C T A C G C T A G T C G A G T A C A G T C C G T A A G C T T G A C A G C T C A T G A T C G G T A C G A T C A G C T C A G T

ZEB1/MA0103.2/Jaspar

Match Rank:8
Score:0.53
Offset:-5
Orientation:forward strand
Alignment:-----CCTGATRWTCTGG
CCTCACCTG---------
 A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G A T A C T G C T G A A C G T C T A G C G T A G A C T A G T C A G C T A C T G T A C G
T G A C A G T C C G A T A G T C C G T A A G T C A G T C A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:9
Score:0.52
Offset:0
Orientation:forward strand
Alignment:CCTGATRWTCTGG
GCTGTG-------
 A G T C A G T C C G A T A C T G C T G A A C G T C T A G C G T A G A C T A G T C A G C T A C T G T A C G
T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:10
Score:0.52
Offset:3
Orientation:forward strand
Alignment:CCTGATRWTCTGG
---VBSYGTCTGG
 A G T C A G T C C G A T A C T G C T G A A C G T C T A G C G T A G A C T A G T C A G C T A C T G T A C G
A C G T A C G T A C G T T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G