p-value: | 1e-9 |
log p-value: | -2.208e+01 |
Information Content per bp: | 1.853 |
Number of Target Sequences with motif | 6.0 |
Percentage of Target Sequences with motif | 0.80% |
Number of Background Sequences with motif | 5.6 |
Percentage of Background Sequences with motif | 0.01% |
Average Position of motif in Targets | 40.2 +/- 25.0bp |
Average Position of motif in Background | 40.6 +/- 21.6bp |
Strand Bias (log2 ratio + to - strand density) | 1.0 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer
Match Rank: | 1 |
Score: | 0.75 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --TCCTTSACCTAKG TGACCTTGACCT--- |
|
|
|
RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer
Match Rank: | 2 |
Score: | 0.71 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --TCCTTSACCTAKG TGACCTTGACCT--- |
|
|
|
NR2F1/MA0017.2/Jaspar
Match Rank: | 3 |
Score: | 0.68 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | TCCTTSACCTAKG CNNTTGACCTTTG |
|
|
|
Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer
Match Rank: | 4 |
Score: | 0.65 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | TCCTTSACCTAKG ---CTGACCTTTG |
|
|
|
THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer
Match Rank: | 5 |
Score: | 0.63 |
Offset: | 4 |
Orientation: | reverse strand |
Alignment: | TCCTTSACCTAKG ----TGACCTYA- |
|
|
|
PB0049.1_Nr2f2_1/Jaspar
Match Rank: | 6 |
Score: | 0.62 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | TCCTTSACCTAKG--- NNNNTGACCTTTNNNN |
|
|
|
MF0004.1_Nuclear_Receptor_class/Jaspar
Match Rank: | 7 |
Score: | 0.62 |
Offset: | 4 |
Orientation: | reverse strand |
Alignment: | TCCTTSACCTAKG ----TGACCT--- |
|
|
|
Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer
Match Rank: | 8 |
Score: | 0.60 |
Offset: | 3 |
Orientation: | forward strand |
Alignment: | TCCTTSACCTAKG ---NTGACCTTGA |
|
|
|
PB0053.1_Rara_1/Jaspar
Match Rank: | 9 |
Score: | 0.60 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | TCCTTSACCTAKG--- NNNGTGACCTTTGNNN |
|
|
|
COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer
Match Rank: | 10 |
Score: | 0.60 |
Offset: | 4 |
Orientation: | reverse strand |
Alignment: | TCCTTSACCTAKG ----TGACCYCT- |
|
|
|