Information for 3-TTTCCCTBGACTTCCG (Motif 4)

G A C T A G C T A C G T A G T C A G T C A G T C A C G T A C G T A C T G G T C A A G T C A C G T A C G T A T G C G A T C A T C G
Reverse Opposite:
A T G C C T A G A T C G G T C A C G T A A C T G A C G T G T A C T G C A C G T A C T A G A C T G A C T G G T C A C T G A C G T A
p-value:1e-13
log p-value:-3.158e+01
Information Content per bp:1.787
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.79%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets62.3 +/- 16.3bp
Average Position of motif in Background44.5 +/- 9.8bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:1
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:TTTCCCTBGACTTCCG
TGACCTTGACCT----
 G A C T A G C T A C G T A G T C A G T C A G T C A C G T A C G T A C T G G T C A A G T C A C G T A C G T A T G C G A T C A T C G
G A C T T A C G G C T A T G A C A G T C A G C T A C G T C T A G T C G A G T A C G T A C A G C T A C G T A C G T A C G T A C G T

Nr2e1/MA0676.1/Jaspar

Match Rank:2
Score:0.55
Offset:6
Orientation:reverse strand
Alignment:TTTCCCTBGACTTCCG
------TTGACTTTT-
 G A C T A G C T A C G T A G T C A G T C A G T C A C G T A C G T A C T G G T C A A G T C A C G T A C G T A T G C G A T C A T C G
A C G T A C G T A C G T A C G T A C G T A C G T C G A T A C G T T C A G C T G A G A T C G A C T G A C T G A C T C G A T A C G T

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:3
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:TTTCCCTBGACTTCCG
--NNACTTGCCTT---
 G A C T A G C T A C G T A G T C A G T C A G T C A C G T A C G T A C T G G T C A A G T C A C G T A C G T A T G C G A T C A T C G
A C G T A C G T T C G A G A T C T G C A A G T C G A C T A G C T A C T G A G T C G A T C G C A T A C G T A C G T A C G T A C G T

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:4
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:TTTCCCTBGACTTCCG
TGACCTTGACCT----
 G A C T A G C T A C G T A G T C A G T C A G T C A C G T A C G T A C T G G T C A A G T C A C G T A C G T A T G C G A T C A T C G
G A C T T C A G T G C A A G T C A G T C G A C T A C G T T A C G C G T A G T A C G A T C G A C T A C G T A C G T A C G T A C G T

NFATC3/MA0625.1/Jaspar

Match Rank:5
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--TTTCCCTBGACTTCCG
ATTTTCCATT--------
 A C G T A C G T G A C T A G C T A C G T A G T C A G T C A G T C A C G T A C G T A C T G G T C A A G T C A C G T A C G T A T G C G A T C A T C G
C G T A G A C T C G A T G C A T A G C T G T A C A T G C C T G A G A C T G C A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFATC1/MA0624.1/Jaspar

Match Rank:6
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--TTTCCCTBGACTTCCG
ATTTTCCATT--------
 A C G T A C G T G A C T A G C T A C G T A G T C A G T C A G T C A C G T A C G T A C T G G T C A A G T C A C G T A C G T A T G C G A T C A T C G
C G T A G C A T C G A T G A C T G A C T T G A C G A T C C T G A G A C T G C A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFAT5/MA0606.1/Jaspar

Match Rank:7
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--TTTCCCTBGACTTCCG
ATTTTCCATT--------
 A C G T A C G T G A C T A G C T A C G T A G T C A G T C A G T C A C G T A C G T A C T G G T C A A G T C A C G T A C G T A T G C G A T C A T C G
C G T A C G A T A C G T A C G T G C A T A G T C A G T C G C T A G A C T C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer

Match Rank:8
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:TTTCCCTBGACTTCCG
TGACCTTTGACCTC--
 G A C T A G C T A C G T A G T C A G T C A G T C A C G T A C G T A C T G G T C A A G T C A C G T A C G T A T G C G A T C A T C G
G A C T T A C G T G C A G T A C G A T C A G C T G A C T G A C T T A C G T G C A G T A C G A T C G A C T A G T C A C G T A C G T

Nr5a2/MA0505.1/Jaspar

Match Rank:9
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--TTTCCCTBGACTTCCG
GCTGACCTTGAACTN---
 A C G T A C G T G A C T A G C T A C G T A G T C A G T C A G T C A C G T A C G T A C T G G T C A A G T C A C G T A C G T A T G C G A T C A T C G
T A C G T G A C G C A T T C A G C T G A A G T C A G T C A G C T C A G T A T C G C T G A T C G A G A T C G A C T A G C T A C G T A C G T A C G T

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:10
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--TTTCCCTBGACTTCCG
ATTTTCCATT--------
 A C G T A C G T G A C T A G C T A C G T A G T C A G T C A G T C A C G T A C G T A C T G G T C A A G T C A C G T A C G T A T G C G A T C A T C G
C G T A A C G T A C G T A C G T A C G T A G T C A G T C C T G A A G C T A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T