Information for 25-ACTAGGCAAC (Motif 39)

T G C A G A T C G A C T G C T A C T A G C A T G A G T C G C T A C T G A G T A C
Reverse Opposite:
C A T G G A C T C G A T T C A G G T A C G A T C C G A T C G T A C T A G A C G T
p-value:1e-1
log p-value:-2.619e+00
Information Content per bp:1.689
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif0.14%
Number of Background Sequences with motif5.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets35.0 +/- 0.0bp
Average Position of motif in Background40.8 +/- 24.2bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIA/MA0670.1/Jaspar

Match Rank:1
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:ACTAGGCAAC
NNTTGGCANN
 T G C A G A T C G A C T G C T A C T A G C A T G A G T C G C T A C T G A G T A C
G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.64
Offset:0
Orientation:forward strand
Alignment:ACTAGGCAAC--
SCCTAGCAACAG
 T G C A G A T C G A C T G C T A C T A G C A T G A G T C G C T A C T G A G T A C A C G T A C G T
A T G C A G T C G T A C A G C T T C G A C T A G G A T C C T G A G T C A A G T C G C T A T C A G

PB0055.1_Rfx4_1/Jaspar

Match Rank:3
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--ACTAGGCAAC---
TACCATAGCAACGGT
 A C G T A C G T T G C A G A T C G A C T G C T A C T A G C A T G A G T C G C T A C T G A G T A C A C G T A C G T A C G T
A G C T G T C A T A G C A T G C G T C A A G C T T C G A C T A G G A T C C T G A C T G A A G T C T A C G T C A G C G A T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:4
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:ACTAGGCAAC
-CTTGGCAA-
 T G C A G A T C G A C T G C T A C T A G C A T G A G T C G C T A C T G A G T A C
A C G T A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A A C G T

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:5
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--ACTAGGCAAC---
CCGCATAGCAACGGA
 A C G T A C G T T G C A G A T C G A C T G C T A C T A G C A T G A G T C G C T A C T G A G T A C A C G T A C G T A C G T
A G T C A G T C T A C G A T G C G C T A G A C T T C G A C T A G G A T C C T G A T C G A A G T C T A C G T C A G C T G A

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--ACTAGGCAAC
WDNCTGGGCA--
 A C G T A C G T T G C A G A T C G A C T G C T A C T A G C A T G A G T C G C T A C T G A G T A C
G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T A C G T

Rfx1/MA0509.1/Jaspar

Match Rank:7
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----ACTAGGCAAC
GTTGCCATGGCAAC
 A C G T A C G T A C G T A C G T T G C A G A T C G A C T G C T A C T A G C A T G A G T C G C T A C T G A G T A C
C T A G A C G T G A C T A C T G A G T C A G T C G C T A G C A T C T A G C T A G G T A C C T G A C T G A A G T C

PB0054.1_Rfx3_1/Jaspar

Match Rank:8
Score:0.62
Offset:-6
Orientation:forward strand
Alignment:------ACTAGGCAAC-------
TGTGACCCTTAGCAACCGATTAA
 A C G T A C G T A C G T A C G T A C G T A C G T T G C A G A T C G A C T G C T A C T A G C A T G A G T C G C T A C T G A G T A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G A C T C A T G A G C T A T C G G T C A G A T C T G A C A T G C G A C T A G C T T C G A C T A G G A T C C T G A C G T A A G T C T A G C T C A G C G T A G C A T G C A T G C T A G C T A

Rfx6(HTH)/Min6b1-Rfx6.HA-ChIP-Seq(GSE62844)/Homer

Match Rank:9
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----ACTAGGCAAC-
KGTTGCTAGGMAACA
 A C G T A C G T A C G T A C G T T G C A G A T C G A C T G C T A C T A G C A T G A G T C G C T A C T G A G T A C A C G T
C A T G A C T G A G C T C G A T C T A G A G T C A G C T C T G A C T A G A C T G T G C A C T G A T C G A A G T C G T C A

PH0040.1_Hmbox1/Jaspar

Match Rank:10
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----ACTAGGCAAC---
GAAAACTAGTTAACATC
 A C G T A C G T A C G T A C G T T G C A G A T C G A C T G C T A C T A G C A T G A G T C G C T A C T G A G T A C A C G T A C G T A C G T
T C A G G C T A C T G A C T G A C G T A A G T C A C G T C T G A C T A G A C G T G C A T C G T A C G T A A G T C C G T A C G A T A T G C