Information for 24-ATTGTGTGAA (Motif 37)

C G T A C A G T C G A T A C T G G C A T A C T G C G A T C T A G C T G A G T C A
Reverse Opposite:
C A G T A G C T A G T C C G T A G T A C C G T A A G T C C G T A G T C A A C G T
p-value:1e-4
log p-value:-1.085e+01
Information Content per bp:1.763
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.24%
Number of Background Sequences with motif95.5
Percentage of Background Sequences with motif0.20%
Average Position of motif in Targets65.9 +/- 18.2bp
Average Position of motif in Background49.8 +/- 24.1bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0168.1_Sox14_2/Jaspar

Match Rank:1
Score:0.81
Offset:-5
Orientation:reverse strand
Alignment:-----ATTGTGTGAA
NNNCCATTGTGTNAN
 A C G T A C G T A C G T A C G T A C G T C G T A C A G T C G A T A C T G G C A T A C T G C G A T C T A G C T G A G T C A
A T C G T G A C A C T G A G T C G A T C C G T A A C G T A C G T T A C G G C A T A T C G A G C T T C A G T G C A T C A G

Sox5/MA0087.1/Jaspar

Match Rank:2
Score:0.76
Offset:0
Orientation:forward strand
Alignment:ATTGTGTGAA
ATTGTTA---
 C G T A C A G T C G A T A C T G G C A T A C T G C G A T C T A G C T G A G T C A
C G T A A C G T A C G T C T A G A G C T G A C T C G A T A C G T A C G T A C G T

SRY/MA0084.1/Jaspar

Match Rank:3
Score:0.75
Offset:0
Orientation:reverse strand
Alignment:ATTGTGTGAA
ATTGTTTAN-
 C G T A C A G T C G A T A C T G G C A T A C T G C G A T C T A G C T G A G T C A
G C T A A G C T A C G T C T A G C G A T C G A T G C A T G C T A G T A C A C G T

Sox17/MA0078.1/Jaspar

Match Rank:4
Score:0.74
Offset:-3
Orientation:forward strand
Alignment:---ATTGTGTGAA
CTCATTGTC----
 A C G T A C G T A C G T C G T A C A G T C G A T A C T G G C A T A C T G C G A T C T A G C T G A G T C A
G A C T G A C T G A T C C G T A A G C T A C G T A C T G A C G T A T G C A C G T A C G T A C G T A C G T

PB0183.1_Sry_2/Jaspar

Match Rank:5
Score:0.73
Offset:-5
Orientation:reverse strand
Alignment:-----ATTGTGTGAA--
CNNNTATTGTTCNNNNN
 A C G T A C G T A C G T A C G T A C G T C G T A C A G T C G A T A C T G G C A T A C T G C G A T C T A G C T G A G T C A A C G T A C G T
A T G C C T G A A G T C A G T C G A C T C G T A A C G T A G C T T C A G G C A T A C G T A G T C G T A C C A T G G C A T C T A G C T G A

MF0011.1_HMG_class/Jaspar

Match Rank:6
Score:0.73
Offset:0
Orientation:forward strand
Alignment:ATTGTGTGAA
ATTGTT----
 C G T A C A G T C G A T A C T G G C A T A C T G C G A T C T A G C T G A G T C A
G C T A A C G T G A C T C T A G G C A T A G C T A C G T A C G T A C G T A C G T

PB0165.1_Sox11_2/Jaspar

Match Rank:7
Score:0.72
Offset:-3
Orientation:forward strand
Alignment:---ATTGTGTGAA-
AAAATTGTTATGAA
 A C G T A C G T A C G T C G T A C A G T C G A T A C T G G C A T A C T G C G A T C T A G C T G A G T C A A C G T
C G T A C T G A C T G A C T G A A C G T G A C T T C A G C G A T G A C T G C T A C A G T T C A G C T G A C G T A

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:8
Score:0.72
Offset:-2
Orientation:forward strand
Alignment:--ATTGTGTGAA
CCATTGTTYB--
 A C G T A C G T C G T A C A G T C G A T A C T G G C A T A C T G C G A T C T A G C T G A G T C A
A T G C G A T C C G T A A G C T C A G T A T C G G C A T A G C T G A C T A C T G A C G T A C G T

SOX9/MA0077.1/Jaspar

Match Rank:9
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--ATTGTGTGAA
CCATTGTTC---
 A C G T A C G T C G T A C A G T C G A T A C T G G C A T A C T G C G A T C T A G C T G A G T C A
A G T C G A T C G C T A C A G T C G A T T A C G C G A T G C A T G A T C A C G T A C G T A C G T

Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer

Match Rank:10
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--ATTGTGTGAA---
CCATTGTATGCAAAT
 A C G T A C G T C G T A C A G T C G A T A C T G G C A T A C T G C G A T C T A G C T G A G T C A A C G T A C G T A C G T
A G T C G A T C G C T A C G A T A C G T T A C G G C A T C T G A G A C T A C T G A G T C G C T A C T G A T C G A C A G T