Information for 17-GGTTGTAAAT (Motif 19)

C T A G T C A G A G C T A C G T C A T G G A C T G T C A C G T A G C T A G C A T
Reverse Opposite:
C G T A C G A T G C A T C A G T C T G A G T A C T G C A T C G A A G T C G A T C
p-value:1e-10
log p-value:-2.398e+01
Information Content per bp:1.662
Number of Target Sequences with motif37.0
Percentage of Target Sequences with motif5.09%
Number of Background Sequences with motif669.7
Percentage of Background Sequences with motif1.39%
Average Position of motif in Targets54.9 +/- 26.0bp
Average Position of motif in Background50.1 +/- 28.6bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0067.1_Hoxc12/Jaspar

Match Rank:1
Score:0.75
Offset:-3
Orientation:forward strand
Alignment:---GGTTGTAAAT----
TTAGGTCGTAAAATTTC
 A C G T A C G T A C G T C T A G T C A G A G C T A C G T C A T G G A C T G T C A C G T A G C T A G C A T A C G T A C G T A C G T A C G T
G A C T G C A T T C G A T C A G T C A G A G C T G T A C C T A G A C G T G C T A C G T A G C T A G C T A G C A T A G C T C G A T G A T C

HOXC12/MA0906.1/Jaspar

Match Rank:2
Score:0.72
Offset:0
Orientation:forward strand
Alignment:GGTTGTAAAT-
GGTCGTAAAAA
 C T A G T C A G A G C T A C G T C A T G G A C T G T C A C G T A G C T A G C A T A C G T
C T A G T C A G G A C T G T A C T C A G A G C T G C T A C G T A G C T A G T C A G C T A

PH0077.1_Hoxd12/Jaspar

Match Rank:3
Score:0.72
Offset:-3
Orientation:forward strand
Alignment:---GGTTGTAAAT----
CAAGGTCGTAAAATCTT
 A C G T A C G T A C G T C T A G T C A G A G C T A C G T C A T G G A C T G T C A C G T A G C T A G C A T A C G T A C G T A C G T A C G T
G A C T G C T A C T G A T A C G T C A G A G C T G T A C C T A G A C G T C G T A C G T A C G T A G C T A G A C T G A T C G C A T C A G T

HOXC11/MA0651.1/Jaspar

Match Rank:4
Score:0.71
Offset:0
Orientation:forward strand
Alignment:GGTTGTAAAT-
GGTCGTAAAAT
 C T A G T C A G A G C T A C G T C A T G G A C T G T C A C G T A G C T A G C A T A C G T
C T A G T C A G G A C T G A T C C T A G C G A T C G T A C G T A G T C A G C T A G C A T

PH0076.1_Hoxd11/Jaspar

Match Rank:5
Score:0.69
Offset:-3
Orientation:forward strand
Alignment:---GGTTGTAAAT----
TAAGGTCGTAAAATCCT
 A C G T A C G T A C G T C T A G T C A G A G C T A C G T C A T G G A C T G T C A C G T A G C T A G C A T A C G T A C G T A C G T A C G T
G A C T G C T A C T G A T C A G T C A G A G C T G A T C C T A G A C G T C G T A C G T A G C T A G C T A G C A T G A T C G A T C C A G T

HOXD11/MA0908.1/Jaspar

Match Rank:6
Score:0.69
Offset:1
Orientation:forward strand
Alignment:GGTTGTAAAT-
-GTCGTAAAAA
 C T A G T C A G A G C T A C G T C A T G G A C T G T C A C G T A G C T A G C A T A C G T
A C G T T C A G A C G T G A T C C T A G C G A T C G T A C G T A G C T A G C T A G C T A

Hoxa11/MA0911.1/Jaspar

Match Rank:7
Score:0.69
Offset:0
Orientation:forward strand
Alignment:GGTTGTAAAT--
GGTCGTAAAATT
 C T A G T C A G A G C T A C G T C A T G G A C T G T C A C G T A G C T A G C A T A C G T A C G T
C T A G T C A G A G C T G A T C C T A G C G A T C G T A C G T A G C T A G C T A G C A T C G A T

PH0065.1_Hoxc10/Jaspar

Match Rank:8
Score:0.69
Offset:-3
Orientation:forward strand
Alignment:---GGTTGTAAAT---
TAAAGTCGTAAAACGT
 A C G T A C G T A C G T C T A G T C A G A G C T A C G T C A T G G A C T G T C A C G T A G C T A G C A T A C G T A C G T A C G T
G A C T C G T A C G T A C T G A T C A G A G C T G T A C C T A G A C G T C G T A C G T A G C T A C G T A G A T C A T C G A C G T

HOXD12/MA0873.1/Jaspar

Match Rank:9
Score:0.69
Offset:0
Orientation:forward strand
Alignment:GGTTGTAAAT-
AGTCGTAAAAA
 C T A G T C A G A G C T A C G T C A T G G A C T G T C A C G T A G C T A G C A T A C G T
T C G A T C A G A G C T T A G C T C A G G A C T C G T A C T G A C G T A G C T A G T C A

PH0066.1_Hoxc11/Jaspar

Match Rank:10
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---GGTTGTAAAT---
TAAAGTCGTAAAATAG
 A C G T A C G T A C G T C T A G T C A G A G C T A C G T C A T G G A C T G T C A C G T A G C T A G C A T A C G T A C G T A C G T
G A C T C T G A C G T A C T G A T C A G A G C T G A T C C T A G A C G T C G T A C G T A C G T A G C T A G A C T C T G A C A T G