p-value: | 1e-12 |
log p-value: | -2.864e+01 |
Information Content per bp: | 1.668 |
Number of Target Sequences with motif | 20.0 |
Percentage of Target Sequences with motif | 2.72% |
Number of Background Sequences with motif | 147.6 |
Percentage of Background Sequences with motif | 0.30% |
Average Position of motif in Targets | 52.7 +/- 27.4bp |
Average Position of motif in Background | 44.3 +/- 25.2bp |
Strand Bias (log2 ratio + to - strand density) | 0.8 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer
Match Rank: | 1 |
Score: | 0.68 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | DAKSTCTGTCTCTTCA --TGTCTGDCACCT-- |
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SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar
Match Rank: | 2 |
Score: | 0.65 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | DAKSTCTGTCTCTTCA -CTGTCTGTCACCT-- |
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ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer
Match Rank: | 3 |
Score: | 0.63 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | DAKSTCTGTCTCTTCA --GCTCGGSCTC---- |
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Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer
Match Rank: | 4 |
Score: | 0.63 |
Offset: | 5 |
Orientation: | forward strand |
Alignment: | DAKSTCTGTCTCTTCA -----CTGTCTGG--- |
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Hand1::Tcf3/MA0092.1/Jaspar
Match Rank: | 5 |
Score: | 0.61 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | DAKSTCTGTCTCTTCA --GGTCTGGCAT---- |
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PB0060.1_Smad3_1/Jaspar
Match Rank: | 6 |
Score: | 0.58 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---DAKSTCTGTCTCTTCA NNTNNTGTCTGGNNTNG-- |
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POL009.1_DCE_S_II/Jaspar
Match Rank: | 7 |
Score: | 0.57 |
Offset: | 4 |
Orientation: | forward strand |
Alignment: | DAKSTCTGTCTCTTCA ----GCTGTG------ |
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Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer
Match Rank: | 8 |
Score: | 0.57 |
Offset: | 3 |
Orientation: | forward strand |
Alignment: | DAKSTCTGTCTCTTCA ---VBSYGTCTGG--- |
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Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer
Match Rank: | 9 |
Score: | 0.56 |
Offset: | 5 |
Orientation: | forward strand |
Alignment: | DAKSTCTGTCTCTTCA -----TWGTCTGV--- |
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PB0166.1_Sox12_2/Jaspar
Match Rank: | 10 |
Score: | 0.55 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -DAKSTCTGTCTCTTCA ANTCCTTTGTCTNNNN- |
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